RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ZMYM2Q9UBW7 1377 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 H0YCG3 227 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 ABLIM1O14639 778 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 TRAK2O60296 914 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 PPM1AP35813 382 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 ZNF568Q3ZCX4 644 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 SFR1Q86XK3 245 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 SLC39A11Q8N1S5 342 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 POF1BQ8WVV4 589 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 STAMQ92783 540 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 KCNN1Q92952 543 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 CUEDC2Q9H467 287 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 SNTG2Q9NY99 539 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 FAM13BQ9NYF5 915 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 SPG21Q9NZD8 308 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 KLK14Q9P0G3 267 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 DNAJB4Q9UDY4 337 aa23.92■■□□□ 1.42
OTUB1-212ENST00000543988 RECQL4O94761 1208 aa23.91■■□□□ 1.42
OTUB1-212ENST00000543988 DDHD2O94830 711 aa23.91■■□□□ 1.42
OTUB1-212ENST00000543988 PROZP22891 400 aa23.91■■□□□ 1.42
OTUB1-212ENST00000543988 NMT1P30419 496 aaKnown RBP23.91■■□□□ 1.42
OTUB1-212ENST00000543988 TMEM173Q86WV6 379 aaPredicted RBP23.91■■□□□ 1.42
OTUB1-212ENST00000543988 FAM178BQ8IXR5 827 aa23.91■■□□□ 1.42
OTUB1-212ENST00000543988 IQUBQ8NA54 791 aa23.91■■□□□ 1.42
OTUB1-212ENST00000543988 TNMDQ9H2S6 317 aa23.91■■□□□ 1.42
OTUB1-212ENST00000543988 KANSL3Q9P2N6 904 aa23.91■■□□□ 1.42
OTUB1-212ENST00000543988 NT5C1B-RDH14C9J2C7 533 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 POLR2DO15514 142 aaKnown RBP23.9■■□□□ 1.42
OTUB1-212ENST00000543988 IRS1P35568 1242 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 SLC11A1P49279 550 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 ALDH7A1P49419 539 aaKnown RBP23.9■■□□□ 1.42
OTUB1-212ENST00000543988 PLCB3Q01970 1234 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 UBE3AQ05086 875 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 SKIV2LQ15477 1246 aaKnown RBP23.9■■□□□ 1.42
OTUB1-212ENST00000543988 MPZL3Q6UWV2 235 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 ZPBP2Q6X784 338 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 APBB1IPQ7Z5R6 666 aaPredicted RBP23.9■■□□□ 1.42
OTUB1-212ENST00000543988 ZBTB33Q86T24 672 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 CEP120Q8N960 986 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 GSTCDQ8NEC7 633 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 BCL7CQ8WUZ0 217 aaPredicted RBP23.9■■□□□ 1.42
OTUB1-212ENST00000543988 SCAND2PQ9GZW5 306 aaPredicted RBP23.9■■□□□ 1.42
OTUB1-212ENST00000543988 KBTBD4Q9NVX7 518 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 MIOSQ9NXC5 875 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 ANKFY1Q9P2R3 1169 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 TBX20Q9UMR3 447 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 GDAQ9Y2T3 454 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 PCDHGC5Q9Y5F6 944 aa23.9■■□□□ 1.42
OTUB1-212ENST00000543988 TOM1L1O75674 476 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 GALTP07902 379 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 GAP43P17677 238 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 SCP2P22307 547 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 TCEAL5Q5H9L2 206 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 ZBTB45Q96K62 511 aaPredicted RBP23.89■■□□□ 1.41
OTUB1-212ENST00000543988 CXCL16Q9H2A7 254 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 NSUN3Q9H649 340 aaKnown RBP23.89■■□□□ 1.41
OTUB1-212ENST00000543988 GDPD2Q9HCC8 539 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 KCNH3Q9ULD8 1083 aa23.89■■□□□ 1.41
OTUB1-212ENST00000543988 FRMD3A2A2Y4 597 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 MCF2P10911 925 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 HARSP12081 509 aaKnown RBP23.88■■□□□ 1.41
OTUB1-212ENST00000543988 IDEP14735 1019 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 PFKFB1P16118 471 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 DSC1Q08554 894 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 ZC2HC1CQ53FD0 456 aaPredicted RBP23.88■■□□□ 1.41
OTUB1-212ENST00000543988 ADALQ6DHV7 355 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 MRPS27Q92552 414 aaKnown RBP23.88■■□□□ 1.41
OTUB1-212ENST00000543988 BICD1Q96G01 975 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 FAM193BQ96PV7 902 aaPredicted RBP23.88■■□□□ 1.41
OTUB1-212ENST00000543988 RPS6KC1Q96S38 1066 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 TCHPQ9BT92 498 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 SEL1LQ9UBV2 794 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 LZTS1Q9Y250 596 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 REV3LO60673 3130 aa23.88■■□□□ 1.41
OTUB1-212ENST00000543988 PTGESO14684 152 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 HNRNPDLO14979 420 aaKnown RBP23.87■■□□□ 1.41
OTUB1-212ENST00000543988 CMA1P23946 247 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 GRM5P41594 1212 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 GTF2BQ00403 316 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 GRIK3Q13003 919 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 NOLC1Q14978 699 aaKnown RBP eCLIP23.87■■□□□ 1.41
OTUB1-212ENST00000543988 MAP4K3Q8IVH8 894 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.87■■□□□ 1.41
OTUB1-212ENST00000543988 IGSF21Q96ID5 467 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 TMEM175Q9BSA9 504 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 TRIM9Q9C026 710 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 ST6GALNAC4Q9H4F1 302 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 MAGEF1Q9HAY2 307 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 TLR9Q9NR96 1032 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 TBC1D7Q9P0N9 293 aa23.87■■□□□ 1.41
OTUB1-212ENST00000543988 A0A1B0GVL5 298 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 PIGRP01833 764 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 ERVFC1P60507 584 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 OSTNP61366 133 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 KRT17Q04695 432 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 COLGALT2Q8IYK4 626 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 SLC17A8Q8NDX2 589 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 TMEM169Q96HH4 297 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 HAPLN2Q9GZV7 340 aa23.86■■□□□ 1.41
OTUB1-212ENST00000543988 MRPL44Q9H9J2 332 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms