RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 MAPK6Q16659 721 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 CDCA2Q69YH5 1023 aaPredicted RBP14.52□□□□□ -0.09
RTN3-213ENST00000543552 POTEGQ6S5H5 508 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 COLGALT2Q8IYK4 626 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 FBXL6Q8N531 539 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 ACSF2Q96CM8 615 aaPredicted RBP14.52□□□□□ -0.09
RTN3-213ENST00000543552 ZFP42Q96MM3 310 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 KLHL5Q96PQ7 755 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 ADPGKQ9BRR6 497 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 SORCS3Q9UPU3 1222 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 HES2Q9Y543 173 aa14.52□□□□□ -0.09
RTN3-213ENST00000543552 B4GALT5O43286 388 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 MED24O75448 989 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 NAMPTP43490 491 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
RTN3-213ENST00000543552 CLCN4P51793 760 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 PRPF4BQ13523 1007 aaKnown RBP14.51□□□□□ -0.09
RTN3-213ENST00000543552 FAM187BQ17R55 369 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 PADI6Q6TGC4 694 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 TMC5Q6UXY8 1006 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 C15orf39Q6ZRI6 1047 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 CCDC149Q6ZUS6 474 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 MAEAQ7L5Y9 396 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 APBB1IPQ7Z5R6 666 aaPredicted RBP14.51□□□□□ -0.09
RTN3-213ENST00000543552 DEPTORQ8TB45 409 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 IFT74Q96LB3 600 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 GPRC5CQ9NQ84 441 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.51□□□□□ -0.09
RTN3-213ENST00000543552 MARCH5Q9NX47 278 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 ZNF318Q5VUA4 2279 aa14.51□□□□□ -0.09
RTN3-213ENST00000543552 C2CD4DB7Z1M9 353 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 LAD1O00515 517 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 C2CD2LO14523 706 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 ST18O60284 1047 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 LILRB3O75022 631 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 C1RP00736 705 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 CYP11B2P19099 503 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 CCT6AP40227 531 aaKnown RBP14.5□□□□□ -0.09
RTN3-213ENST00000543552 EFNA5P52803 228 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 CYP26C1Q6V0L0 522 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 OTOP3Q7RTS5 596 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 GPR149Q86SP6 731 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 GPR65Q8IYL9 337 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 ZDHHC14Q8IZN3 488 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 C12orf76Q8N812 135 aaPredicted RBP14.5□□□□□ -0.09
RTN3-213ENST00000543552 KREMEN2Q8NCW0 462 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 KIFAP3Q92845 792 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 FZD8Q9H461 694 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 LRWD1Q9UFC0 647 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 PARP2Q9UGN5 583 aa14.5□□□□□ -0.09
RTN3-213ENST00000543552 TDRD15B5MCY1 1934 aaKnown RBP14.5□□□□□ -0.09
RTN3-213ENST00000543552 SF3B1O75533 1304 aaKnown RBP eCLIP14.49□□□□□ -0.092e-10■■■■■ 69.9
RTN3-213ENST00000543552 PHLPP2Q6ZVD8 1323 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 A0A087WWV3 80 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 GLUD1P00367 558 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 PRKCBP05771 671 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 AKAP5P24588 427 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 U2AF2P26368 475 aaKnown RBP eCLIP14.49□□□□□ -0.099e-6■□□□□ 9.5
RTN3-213ENST00000543552 PTPN5P54829 565 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 DSG1Q02413 1049 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 PDIA5Q14554 519 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 USP41Q3LFD5 358 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 DCAF4L1Q3SXM0 396 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
RTN3-213ENST00000543552 CMASQ8NFW8 434 aaPredicted RBP14.49□□□□□ -0.09
RTN3-213ENST00000543552 MAN1C1Q9NR34 630 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 CDH22Q9UJ99 828 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 ADAM28Q9UKQ2 775 aa14.49□□□□□ -0.09
RTN3-213ENST00000543552 ZDBF2Q9HCK1 2354 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 ACKR2O00590 384 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 TEX28O15482 410 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 WEE2P0C1S8 567 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 NHLH1Q02575 133 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 RABEP1Q15276 862 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 KIAA0319Q5VV43 1072 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 FUT10Q6P4F1 479 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 CDR2LQ86X02 465 aaPredicted RBP14.48□□□□□ -0.09
RTN3-213ENST00000543552 SNX29Q8TEQ0 813 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 HDAC7Q8WUI4 952 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 STAMQ92783 540 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 ASIC4Q96FT7 647 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 RHOBTB2Q9BYZ6 727 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 IRF2BPLQ9H1B7 796 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 BHMT2Q9H2M3 363 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 PDZD7Q9H5P4 517 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 UPF2Q9HAU5 1272 aaKnown RBP14.48□□□□□ -0.09
RTN3-213ENST00000543552 RXFP1Q9HBX9 757 aa14.48□□□□□ -0.09
RTN3-213ENST00000543552 TADA2AO75478 443 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 EFEMP2O95967 443 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 NUBP1P53384 320 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 ELAVL2Q12926 359 aaKnown RBP14.47□□□□□ -0.09
RTN3-213ENST00000543552 TUSC3Q13454 348 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 HSP90AA2PQ14568 343 aaPredicted RBP14.47□□□□□ -0.09
RTN3-213ENST00000543552 KRT79Q5XKE5 535 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 IGSF22Q8N9C0 903 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 CCDC113Q9H0I3 377 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 PLEKHA4Q9H4M7 779 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 CHST7Q9NS84 486 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms