RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 KRT17Q04695 432 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 TMEM132DQ14C87 1099 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 KIAA1755Q5JYT7 1200 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 VSTM4Q8IW00 320 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 LRRC71Q8N4P6 559 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 CCSER1Q9C0I3 900 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 EHD2Q9NZN4 543 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 KLHL8Q9P2G9 620 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 IP6K2Q9UHH9 426 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 FAN1Q9Y2M0 1017 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 LGALS16A8MUM7 142 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 NDUFA10O95299 355 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 VCAM1P19320 739 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 CCND1P24385 295 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 TCF7P36402 384 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 GRIK1P39086 918 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 THPOP40225 353 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 KPNA2P52292 529 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 DDR1Q08345 913 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 RPUSD2Q8IZ73 545 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PPFIBP2Q8ND30 876 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 CHMP6Q96FZ7 201 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 TMEM169Q96HH4 297 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 LSM7Q9UK45 103 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 TLK1Q9UKI8 766 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 EMSYQ7Z589 1322 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 WNT10BO00744 389 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 CD4P01730 458 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 ATP1A3P13637 1013 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 CDC25BP30305 580 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 OR1G1P47890 313 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 BFSP2Q13515 415 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 RBBP5Q15291 538 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 EFHC2Q5JST6 749 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PLA2G4FQ68DD2 849 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 CYP4F22Q6NT55 531 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 ARHGAP24Q8N264 748 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 MICALL1Q8N3F8 863 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 RDM1Q8NG50 284 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 AKT1S1Q96B36 256 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 RBM41Q96IZ5 413 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 FAM114A2Q9NRY5 505 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 TMCC3Q9ULS5 477 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 TMX2Q9Y320 296 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 MRPL42Q9Y6G3 142 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PDHXO00330 501 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PDXKO00764 312 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 MOCS3O95396 460 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PGK2P07205 417 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 SUPT20HL2P0C7V6 817 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 KCNA2P16389 499 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 SOX5P35711 763 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 NLRP11P59045 1033 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 ZKSCAN8Q15776 578 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PDIK1LQ8N165 341 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PBKQ96KB5 322 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 DDX50Q9BQ39 737 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 RTFDC1Q9BY42 306 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 ZMYND12Q9H0C1 365 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 STARD7Q9NQZ5 370 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 DYRK4Q9NR20 520 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 RNF14Q9UBS8 474 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 TJP2Q9UDY2 1190 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PCDHB7Q9Y5E2 793 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PCDHA13Q9Y5I0 950 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 DDTLA6NHG4 134 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 GPC4O75487 556 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 TJP3O95049 919 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 MAP2K2P36507 400 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 ACOT2P49753 483 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 ATN1P54259 1190 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 MRPS35P82673 323 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 PLIN5Q00G26 463 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 FAM102AQ5T9C2 384 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 NOTUMQ6P988 496 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 SH3TC2Q8TF17 1288 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 VPS39Q96JC1 886 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 FSD1LQ9BXM9 530 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 INTS2Q9H0H0 1204 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 SIK2Q9H0K1 926 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 SYNGAP1Q96PV0 1343 aa7.34□□□□□ -1.23
SRGAP1-206ENST00000543397 ADM5C9JUS6 153 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 PLS3P13797 630 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 CA4P22748 312 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 ALDH7A1P49419 539 aaKnown RBP7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 ATF7IP2Q5U623 682 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 TRIM72Q6ZMU5 477 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 B4GALNT4Q76KP1 1039 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 PCGF5Q86SE9 256 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 CABS1Q96KC9 395 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 SPATA17Q96L03 361 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 TRPC7Q9HCX4 862 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 CDC23Q9UJX2 597 aa7.34□□□□□ -1.24
SRGAP1-206ENST00000543397 GAS2O43903 313 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 SKIP12755 728 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 PLTPP55058 493 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 HERVK_113P62684 666 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 GPC5P78333 572 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 CDK17Q00537 523 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms