RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 GRB10Q13322 594 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 AP3B2Q13367 1082 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 NAIF1Q69YI7 327 aaPredicted RBP14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 KRT39Q6A163 491 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 DEPDC1BQ8WUY9 529 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 STAMBPL1Q96FJ0 436 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 LRGUKQ96M69 825 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 TRIM56Q9BRZ2 755 aaKnown RBP14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 MTMR4Q9NYA4 1195 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 PHF2O75151 1096 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 CA8P35219 290 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 PRELPP51888 382 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 ERVK-9P63128 1117 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 SLC30A9Q6PML9 568 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 FGD4Q96M96 766 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 NLRP4Q96MN2 994 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 NDE1Q9NXR1 346 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 SPATA31A3Q5VYP0 1347 aa14.7□□□□□ -0.06
RPS6KC1-206ENST00000543354 PIK3R2O00459 728 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 TRMT10CQ7L0Y3 403 aaKnown RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 NUDCD3Q8IVD9 361 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 ATL2Q8NHH9 583 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 VCPKMTQ9H867 229 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 HAO1Q9UJM8 370 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 APOBEC2Q9Y235 224 aaKnown RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 TTC36A6NLP5 189 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 UBTFL6P0CB48 400 aaPredicted RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 ITGA8P53708 1063 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 GABPAQ06546 454 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 SEC23AQ15436 765 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 ATG16L1Q676U5 607 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 RHOT1Q8IXI2 618 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 ELOA2Q8IYF1 753 aaPredicted RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 ACSF2Q96CM8 615 aaPredicted RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 HEXIM2Q96MH2 286 aaKnown RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 DUSP9Q99956 384 aaKnown RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 TUBB6Q9BUF5 446 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 TMBIM4Q9HC24 238 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 HMGB2P26583 209 aaKnown RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 ALDH18A1P54886 795 aaKnown RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 CENPPQ6IPU0 288 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 BRINP3Q76B58 766 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 ZNF571Q7Z3V5 609 aaPredicted RBP14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 CENPKQ9BS16 269 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 PI4K2AQ9BTU6 479 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 PLA2G12BQ9BX93 195 aa14.69□□□□□ -0.06
RPS6KC1-206ENST00000543354 FOXN3O00409 490 aaPredicted RBP14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 CLEC4GQ6UXB4 293 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 TMEM35BQ8NCS4 154 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 KIAA0895Q8NCT3 520 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.68□□□□□ -0.069e-18■■■■■ 145.2
RPS6KC1-206ENST00000543354 CALR3Q96L12 384 aaKnown RBP14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 MED10Q9BTT4 135 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 THTPAQ9BU02 230 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 ZNF408Q9H9D4 720 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 KIF9Q9HAQ2 790 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 SLC9A2Q9UBY0 812 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 KCNG1Q9UIX4 513 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 TLK1Q9UKI8 766 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 LMTK3Q96Q04 1460 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 LOC100653049A0A140TA62 436 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 FAM47DPA6NHR8 397 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 KRT34O76011 436 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 GNA15P30679 374 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 COL15A1P39059 1388 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 MDM2Q00987 491 aaPredicted RBP14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 MTMR1Q13613 665 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 RASSF3Q86WH2 238 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 FBXL13Q8NEE6 735 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 USP32Q8NFA0 1604 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 SCINQ9Y6U3 715 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 WTIPA6NIX2 430 aaPredicted RBP14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 ZBBXA8MT70 800 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 H0YCG3 227 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 HSPA4LO95757 839 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 SERPINB4P48594 390 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 ZNF543Q08ER8 600 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 NFIXQ14938 502 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 TRADDQ15628 312 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 NCAPG2Q86XI2 1143 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 GLIS3Q8NEA6 775 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 ELMO3Q96BJ8 720 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 RBM41Q96IZ5 413 aaKnown RBP14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.68□□□□□ -0.06
RPS6KC1-206ENST00000543354 MYO3BQ8WXR4 1341 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 E2F8A0AVK6 867 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 EPHB6O15197 1021 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 PAX7P23759 505 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 GARSP41250 739 aaKnown RBP14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 PHEXP78562 749 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 IFI35P80217 286 aaPredicted RBP14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 FOXD4Q12950 439 aaPredicted RBP14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 MAPK7Q13164 816 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 HIF1AQ16665 826 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 TMEM179Q6ZVK1 233 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 DNAJC9Q8WXX5 260 aa14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
RPS6KC1-206ENST00000543354 NEU2Q9Y3R4 380 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms