RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	DHX15	O43143	795 aa	Known RBP	7.25	□□□□□ -1.25
CIT-213	ENST00000543324	FOS	P01100	380 aa	Predicted RBP	7.25	□□□□□ -1.25
CIT-213	ENST00000543324	CHRNA1	P02708	482 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	CYP3A4	P08684	503 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	CPA1	P15085	419 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	CD72	P21854	359 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	RPS6KB1	P23443	525 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	MPL	P40238	635 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	RAP1GAP	P47736	663 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	FNTB	P49356	437 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	CEP55	Q53EZ4	464 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	CCDC82	Q8N4S0	544 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	PIP4K2C	Q8TBX8	421 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	SEPT1	Q8WYJ6	367 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	MRPS27	Q92552	414 aa	Known RBP	7.25	□□□□□ -1.25
CIT-213	ENST00000543324	LENG9	Q96B70	501 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	KIF2C	Q99661	725 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	MXRA8	Q9BRK3	442 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	ANO3	Q9BYT9	981 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	SETD4	Q9NVD3	440 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	ZNF215	Q9UL58	517 aa	Predicted RBP	7.25	□□□□□ -1.25
CIT-213	ENST00000543324	ZKSCAN5	Q9Y2L8	839 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	SPG11	Q96JI7	2443 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	UQCRHL	A0A096LP55	91 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	SPAAR	A0A1B0GVQ0	90 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	C2orf71	A6NGG8	1288 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	SPDYE3	A6NKU9	549 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	ZBTB42	B2RXF5	422 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	ANHX	E9PGG2	379 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	FAM86B1	E9PN63	330 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324		M0R2N6	131 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	PRPF3	O43395	683 aa	Known RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	BAG4	O95429	457 aa	Known RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CCNE2	O96020	404 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	UQCRH	P07919	91 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CTSH	P09668	335 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	FAM86B2	P0C5J1	330 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	GNAT1	P11488	350 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	SCG2	P13521	617 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	IFNAR1	P17181	557 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	GBP2	P32456	591 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CIITA	P33076	1130 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	ADD1	P35611	737 aa	Known RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CCR3	P51677	355 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	ADCY7	P51828	1080 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	NAPA	P54920	295 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	GPC5	P78333	572 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	NUCB2	P80303	420 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	SIM1	P81133	766 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	ARHGAP4	P98171	946 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	PLCB3	Q01970	1234 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	HTR4	Q13639	388 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	TOB2	Q14106	344 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	NPY5R	Q15761	445 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	SLC44A4	Q53GD3	710 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	TAF2	Q6P1X5	1199 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CCNI2	Q6ZMN8	369 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CEP68	Q76N32	757 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	PLPPR4	Q7Z2D5	763 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	LONP2	Q86WA8	852 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	THNSL1	Q8IYQ7	743 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	BRF1	Q92994	677 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	LIN37	Q96GY3	246 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	JAKMIP1	Q96N16	626 aa	Known RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	DCBLD2	Q96PD2	775 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	PHF12	Q96QT6	1004 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	NELL2	Q99435	816 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	IER2	Q9BTL4	223 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	RNF26	Q9BY78	433 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	GLT8D2	Q9H1C3	349 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CHRD	Q9H2X0	955 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	AGO4	Q9HCK5	861 aa	Known RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	JPH1	Q9HDC5	661 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	ERAP1	Q9NZ08	941 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	HSPBP1	Q9NZL4	362 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	SLC9A2	Q9UBY0	812 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CCDC39	Q9UFE4	941 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	TUBE1	Q9UJT0	475 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324		V9GY48	417 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	ABCA2	Q9BZC7	2435 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	KDM3A	Q9Y4C1	1321 aa		7.24	□□□□□ -1.25
CIT-213	ENST00000543324	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.24	□□□□□ -1.25
CIT-213	ENST00000543324	CCDC196	A0A1B0GTZ2	297 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	TEX51	A0A1B0GUA7	166 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	LNP1	A1A4G5	178 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	SMCO2	A6NFE2	343 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	REC8	O95072	547 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	RPLP2	P05387	115 aa	Known RBP	7.23	□□□□□ -1.25
CIT-213	ENST00000543324	EPCAM	P16422	314 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	RDX	P35241	583 aa	Known RBP	7.23	□□□□□ -1.25
CIT-213	ENST00000543324	METAP2	P50579	478 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
CIT-213	ENST00000543324	ACTR2	P61160	394 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	DMTN	Q08495	405 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	LY6D	Q14210	128 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	LPIN1	Q14693	890 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	GRIK4	Q16099	956 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	FBXO47	Q5MNV8	452 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	BLOC1S2	Q6QNY1	142 aa		7.23	□□□□□ -1.25
CIT-213	ENST00000543324	ABHD15	Q6UXT9	468 aa		7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms