RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 NKX1-2Q9UD57 310 aaPredicted RBP25.41■■□□□ 1.66
SHD-201ENST00000543264 MSH4O15457 936 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 UFL1O94874 794 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 UNC5CO95185 931 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 MOXD1Q6UVY6 613 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 UTP4Q969X6 686 aaKnown RBP25.4■■□□□ 1.66
SHD-201ENST00000543264 YIPF3Q9GZM5 350 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.4■■□□□ 1.66
SHD-201ENST00000543264 TULP1O00294 542 aaPredicted RBP25.4■■□□□ 1.66
SHD-201ENST00000543264 TBX3O15119 743 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 CLDN3O15551 220 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 HIP1RO75146 1068 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 UPP2O95045 317 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 GPSM2P81274 684 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 TPH2Q8IWU9 490 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 SRRM1Q8IYB3 904 aaKnown RBP25.4■■□□□ 1.66
SHD-201ENST00000543264 CD101Q93033 1021 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 FAM163AQ96GL9 167 aaPredicted RBP25.4■■□□□ 1.66
SHD-201ENST00000543264 NAF1Q96HR8 494 aaKnown RBP25.4■■□□□ 1.66
SHD-201ENST00000543264 PAIP2Q9BPZ3 127 aaKnown RBP25.4■■□□□ 1.66
SHD-201ENST00000543264 AGPAT3Q9NRZ7 376 aa25.4■■□□□ 1.66
SHD-201ENST00000543264 SPATS2LQ9NUQ6 558 aaKnown RBP25.4■■□□□ 1.66
SHD-201ENST00000543264 EXOC3O60645 756 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 TTC4O95801 387 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 Q4G0T1 1027 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 RNF43Q68DV7 783 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 ARHGEF19Q8IW93 802 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 FBF1Q8TES7 1133 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 CRYGNQ8WXF5 182 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 RAB3IPQ96QF0 476 aaPredicted RBP25.39■■□□□ 1.66
SHD-201ENST00000543264 MOV10L1Q9BXT6 1211 aaKnown RBP25.39■■□□□ 1.66
SHD-201ENST00000543264 PITPNM3Q9BZ71 974 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 NKIRAS1Q9NYS0 192 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 SERPINB13Q9UIV8 391 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 DAGLAQ9Y4D2 1042 aa25.39■■□□□ 1.66
SHD-201ENST00000543264 THAP12O43422 761 aa25.39■■□□□ 1.65
SHD-201ENST00000543264 MAGEB18Q96M61 343 aa25.39■■□□□ 1.65
SHD-201ENST00000543264 PWWP2AQ96N64 755 aa25.39■■□□□ 1.65
SHD-201ENST00000543264 PCDHB18PQ96TA0 734 aa25.39■■□□□ 1.65
SHD-201ENST00000543264 PARVGQ9HBI0 331 aa25.39■■□□□ 1.65
SHD-201ENST00000543264 DDX4Q9NQI0 724 aaKnown RBP25.39■■□□□ 1.65
SHD-201ENST00000543264 WHRNQ9P202 907 aa25.39■■□□□ 1.65
SHD-201ENST00000543264 CCNG1P51959 295 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 MKRN3Q13064 507 aaKnown RBP25.38■■□□□ 1.65
SHD-201ENST00000543264 MTFR1Q15390 333 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 ARHGEF18Q6ZSZ5 1173 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 LMO3Q8TAP4 145 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 FAM20AQ96MK3 541 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 LUC7L3O95232 432 aaKnown RBP25.38■■□□□ 1.65
SHD-201ENST00000543264 BFSP1Q12934 665 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 AP3B2Q13367 1082 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 USH1GQ495M9 461 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 SGO2Q562F6 1265 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 VSIG1Q86XK7 387 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 LRRC19Q9H756 370 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 VAV3Q9UKW4 847 aa25.38■■□□□ 1.65
SHD-201ENST00000543264 GAKO14976 1311 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 SGPL1O95470 568 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 CETPP11597 493 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 FOXN2P32314 431 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 DLG4P78352 724 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 RNASELQ05823 741 aaKnown RBP25.37■■□□□ 1.65
SHD-201ENST00000543264 INTS8Q75QN2 995 aaKnown RBP25.37■■□□□ 1.65
SHD-201ENST00000543264 ZNF720Q7Z2F6 126 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 FAM178BQ8IXR5 827 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 POLR3CQ9BUI4 534 aaPredicted RBP25.37■■□□□ 1.65
SHD-201ENST00000543264 NUP85Q9BW27 656 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 CDCA7Q9BWT1 371 aaPredicted RBP25.37■■□□□ 1.65
SHD-201ENST00000543264 OSBPL1AQ9BXW6 950 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 MYLK2Q9H1R3 596 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 DMAC2Q9NW81 257 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 CHRNB2P17787 502 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 TAC1P20366 129 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 ZNF76P36508 570 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 SKIV2L2P42285 1042 aaKnown RBP25.37■■□□□ 1.65
SHD-201ENST00000543264 RWDD2BP57060 319 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 NFIL3Q16649 462 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 NSMFQ6X4W1 530 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 ZNF564Q8TBZ8 553 aaPredicted RBP25.37■■□□□ 1.65
SHD-201ENST00000543264 TMEM237Q96Q45 408 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 ACP6Q9NPH0 428 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 NAALADL1Q9UQQ1 740 aa25.37■■□□□ 1.65
SHD-201ENST00000543264 LIN7AO14910 233 aaPredicted RBP25.36■■□□□ 1.65
SHD-201ENST00000543264 CHMP2AO43633 222 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 ITIH2P19823 946 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 SHMT1P34896 483 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 ITGA8P53708 1063 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 RHBDF2Q6PJF5 856 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 C1orf186Q6ZWK4 172 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 TXLNGQ9NUQ3 528 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 LINGO3P0C6S8 592 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 TAL1P17542 331 aaPredicted RBP25.36■■□□□ 1.65
SHD-201ENST00000543264 VPS41P49754 854 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 SYCP3Q8IZU3 236 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 MORC4Q8TE76 937 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 ATG4AQ8WYN0 398 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 KAT5Q92993 513 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 ZMYND8Q9ULU4 1186 aaPredicted RBP25.36■■□□□ 1.65
SHD-201ENST00000543264 STK24Q9Y6E0 443 aa25.36■■□□□ 1.65
SHD-201ENST00000543264 EMSYQ7Z589 1322 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms