RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 FAM213AQ9BRX8 229 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 HAPLN2Q9GZV7 340 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 PDZD7Q9H5P4 517 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 C11orf49Q9H6J7 331 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 PTPRHQ9HD43 1115 aa11.64□□□□□ -0.55
DDB1-221ENST00000543162 NOC2LQ9Y3T9 749 aaKnown RBP11.64□□□□□ -0.55
DDB1-221ENST00000543162 A0A1B0GTH6 734 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 ZNF233A6NK53 670 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 LGALS16A8MUM7 142 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 DCDC2CA8MYV0 355 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 ABLIM1O14639 778 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 OGTO15294 1046 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 RPS6KA5O75582 802 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 CD4P01730 458 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 MCF2P10911 925 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 AXLP30530 894 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 BFSP2Q13515 415 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 TRIM60Q495X7 471 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 VWA3BQ502W6 1294 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 ZNF618Q5T7W0 954 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 NOTUMQ6P988 496 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 INTS8Q75QN2 995 aaKnown RBP11.63□□□□□ -0.55
DDB1-221ENST00000543162 ANKRD33Q7Z3H0 272 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 FAM228AQ86W67 206 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 CDR2LQ86X02 465 aaPredicted RBP11.63□□□□□ -0.55
DDB1-221ENST00000543162 CBWD2Q8IUF1 395 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 ZSWIM2Q8NEG5 633 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 BORCS6Q96GS4 357 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 MRFAP1L1Q96HT8 127 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 PAWRQ96IZ0 340 aaKnown RBP11.63□□□□□ -0.55
DDB1-221ENST00000543162 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 ADPGKQ9BRR6 497 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 CDT1Q9H211 546 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
DDB1-221ENST00000543162 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
DDB1-221ENST00000543162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.63□□□□□ -0.55
DDB1-221ENST00000543162 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
DDB1-221ENST00000543162 GPR182O15218 404 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 ADRB2P07550 413 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 GHRP10912 638 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 HOXA11P31270 313 aaPredicted RBP11.62□□□□□ -0.55
DDB1-221ENST00000543162 ACOT2P49753 483 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 TLE2Q04725 743 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 RBL2Q08999 1139 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 BFSP1Q12934 665 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 NFX1Q12986 1120 aaKnown RBP11.62□□□□□ -0.55
DDB1-221ENST00000543162 NR1I3Q14994 352 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 DCAF4L1Q3SXM0 396 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 DCAF17Q5H9S7 520 aaPredicted RBP11.62□□□□□ -0.55
DDB1-221ENST00000543162 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 FBXO47Q5MNV8 452 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 FKBP15Q5T1M5 1219 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 TCERG1LQ5VWI1 586 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 SLC27A1Q6PCB7 646 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 NECAB2Q7Z6G3 386 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 USP38Q8NB14 1042 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 TOX2Q96NM4 488 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 NDST4Q9H3R1 872 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 ST3GAL5Q9UNP4 418 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
DDB1-221ENST00000543162 SQORQ9Y6N5 450 aa11.62□□□□□ -0.55
DDB1-221ENST00000543162 NPTXRO95502 500 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 SELPP16109 830 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 CDC25BP30305 580 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 VAMP7P51809 220 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 UBXN1Q04323 297 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 CYP24A1Q07973 514 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 PAK2Q13177 524 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 LPIN1Q14693 890 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 KYAT1Q16773 422 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 SEZ6Q53EL9 994 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 CRELD2Q6UXH1 353 aaPredicted RBP11.61□□□□□ -0.55
DDB1-221ENST00000543162 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 USP37Q86T82 979 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 DRC7Q8IY82 874 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 THNSL1Q8IYQ7 743 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 TMC2Q8TDI7 906 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 SLC35C1Q96A29 364 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 CCDC51Q96ER9 411 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 MFSD14AQ96MC6 490 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 AGO3Q9H9G7 860 aaKnown RBP11.61□□□□□ -0.55
DDB1-221ENST00000543162 ERVK-5Q9HDB9 667 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 INTS13Q9NVM9 706 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 RBAKQ9NYW8 714 aaPredicted RBP11.61□□□□□ -0.55
DDB1-221ENST00000543162 ATP11BQ9Y2G3 1177 aa11.61□□□□□ -0.55
DDB1-221ENST00000543162 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 TEX33O43247 280 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 FAM189A1O60320 539 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 STX10O60499 249 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 AFPP02771 609 aaKnown RBP11.6□□□□□ -0.55
DDB1-221ENST00000543162 CLTAP09496 248 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 TRIM49P0CI25 452 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 TRIM49CP0CI26 452 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms