RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 COL4A6Q14031 1691 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 CLDN3O15551 220 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 CA3P07451 260 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 MCL1Q07820 350 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 CLLU1OSQ5K130 101 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 ZBTB33Q86T24 672 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 ABI1Q8IZP0 508 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 ZNF507Q8TCN5 953 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 RSPH1Q8WYR4 309 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 TIFAQ96CG3 184 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 LRCH3Q96II8 777 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 CASD1Q96PB1 797 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 TMEM206Q9H813 350 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 RSAD1Q9HA92 442 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 SLC39A2Q9NP94 309 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 UBN1Q9NPG3 1134 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 ANKFY1Q9P2R3 1169 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 TBKBP1A7MCY6 615 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 SMC2O95347 1197 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 STK4Q13043 487 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 BTG3Q14201 252 aaPredicted RBP18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 SLC39A4Q6P5W5 647 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 GLB1LQ6UWU2 654 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 SYCP3Q8IZU3 236 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 KIAA0895Q8NCT3 520 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 SPATA20Q8TB22 786 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 HELQQ8TDG4 1101 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 GSDMAQ96QA5 445 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 APOL6Q9BWW8 343 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 SLC28A3Q9HAS3 691 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 GIT1Q9Y2X7 761 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 PCDHA5Q9Y5H7 936 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 STYXL1Q9Y6J8 313 aa18.73■□□□□ 0.59
RABGGTA-203ENST00000543002 UBE4BO95155 1302 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 TMEM265A0A087WTH1 108 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 ANKRD63C9JTQ0 380 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 OFD1O75665 1012 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 ARHGEF15O94989 841 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 GRM5P41594 1212 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 MATR3P43243 847 aaKnown RBP eCLIP18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 TAP1Q03518 808 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 BMT2Q1RMZ1 405 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 PAN2Q504Q3 1202 aaKnown RBP18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 SLFN12LQ6IEE8 588 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 FIBCD1Q8N539 461 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 SCFD1Q8WVM8 642 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 SMARCE1Q969G3 411 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 HAPLN2Q9GZV7 340 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 IKZF4Q9H2S9 585 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 RMND1Q9NWS8 449 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 SNTG2Q9NY99 539 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 PARP2Q9UGN5 583 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 LAMA3Q16787 3333 aa18.72■□□□□ 0.59
RABGGTA-203ENST00000543002 ZMYM2Q9UBW7 1377 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 FNDC1Q4ZHG4 1894 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 A0A0B4J269 797 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 LINC01553A4QN01 128 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 INPPL1O15357 1258 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 HARSP12081 509 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 AKAP5P24588 427 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 HOXD13P35453 343 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 FXR1P51114 621 aaKnown RBP eCLIP18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 NOMO2Q5JPE7 1267 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 PPP2R2DQ66LE6 453 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 GPR153Q6NV75 609 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 CEP120Q8N960 986 aa18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 ERCC4Q92889 916 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 CCDC94Q9BW85 323 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 MRPL9Q9BYD2 267 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-203ENST00000543002 TISP43B9A030 160 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 RECQL4O94761 1208 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 THNSL1Q8IYQ7 743 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 LRRC43Q8N309 656 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 GAD1Q99259 594 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 MSTO1Q9BUK6 570 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 GBP3Q9H0R5 595 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 INPP5FQ9Y2H2 1132 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 GDAQ9Y2T3 454 aa18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 MRPL42Q9Y6G3 142 aaKnown RBP18.7■□□□□ 0.58
RABGGTA-203ENST00000543002 ARL5CA6NH57 179 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 OGTO15294 1046 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 LINC00271P0C7V0 271 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 ADSSP30520 456 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 MCM4P33991 863 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 MLH1P40692 756 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 KYAT1Q16773 422 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 KNOP1Q1ED39 458 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 LRRC55Q6ZSA7 311 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 NELFCDQ8IXH7 590 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 URGCPQ8TCY9 931 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 GPT2Q8TD30 523 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 CLP1Q92989 425 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 ZFP42Q96MM3 310 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 ACAP3Q96P50 834 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 TGS1Q96RS0 853 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 CLSTN2Q9H4D0 955 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 ZNF576Q9H609 170 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms