RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 CNNM3Q8NE01 707 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 DNASE1L2Q92874 299 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 B3GALT6Q96L58 329 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 COLEC11Q9BWP8 271 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 GPR62Q9BZJ7 368 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 DISC1Q9NRI5 854 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 KCNH3Q9ULD8 1083 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 NDRG2Q9UN36 371 aaKnown RBP10.55□□□□□ -0.72
C2CD3-219ENST00000542930 GCN1Q92616 2671 aaKnown RBP10.55□□□□□ -0.72
C2CD3-219ENST00000542930 RALGAPA1Q6GYQ0 2036 aa10.55□□□□□ -0.72
C2CD3-219ENST00000542930 F5P12259 2224 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 SMG1Q96Q15 3661 aaKnown RBP10.54□□□□□ -0.72
C2CD3-219ENST00000542930 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 SH2B2O14492 632 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-219ENST00000542930 PRC1O43663 620 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 KCNK5O95279 499 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 C8AP07357 584 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 POU2F2P09086 479 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 RPL17P18621 184 aaKnown RBP10.54□□□□□ -0.72
C2CD3-219ENST00000542930 PTH1RQ03431 593 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 UGCGQ16739 394 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 MTERF2Q49AM1 385 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 UBXN11Q5T124 520 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 FUT10Q6P4F1 479 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 LRSAM1Q6UWE0 723 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 ZNF713Q8N859 430 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-219ENST00000542930 TMEM87BQ96K49 555 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 NLRP4Q96MN2 994 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 CEP89Q96ST8 783 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 NIFKQ9BYG3 293 aaKnown RBP10.54□□□□□ -0.72
C2CD3-219ENST00000542930 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 GDE1Q9NZC3 331 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 SUCLA2Q9P2R7 463 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-219ENST00000542930 ADAM28Q9UKQ2 775 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 POLIQ9UNA4 740 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 LAMA5O15230 3695 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 LOC400499M0QZD8 3231 aa10.54□□□□□ -0.72
C2CD3-219ENST00000542930 TMEM8BA6NDV4 472 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 ARL5CA6NH57 179 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 CCL16O15467 120 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 ZNF806P0C7X5 589 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 ITGA4P13612 1032 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 HOXA11P31270 313 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-219ENST00000542930 SFNP31947 248 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 MLH1P40692 756 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 LIFRP42702 1097 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 SATB1Q01826 763 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 SF3A2Q15428 464 aaKnown RBP10.53□□□□□ -0.72
C2CD3-219ENST00000542930 XKR3Q5GH77 459 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 STPG1Q5TH74 334 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 JAKMIP3Q5VZ66 844 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 LONP2Q86WA8 852 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 KSR1Q8IVT5 923 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-219ENST00000542930 C12orf50Q8NA57 414 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-219ENST00000542930 SMG8Q8ND04 991 aaKnown RBP10.53□□□□□ -0.72
C2CD3-219ENST00000542930 CLSTN3Q9BQT9 956 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 LSM14BQ9BX40 385 aaKnown RBP10.53□□□□□ -0.72
C2CD3-219ENST00000542930 PLA2G2FQ9BZM2 168 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 LMAN1LQ9HAT1 526 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 SEPT9Q9UHD8 586 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-219ENST00000542930 SLC12A7Q9Y666 1083 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 ITPR1Q14643 2758 aa10.53□□□□□ -0.72
C2CD3-219ENST00000542930 FLNBO75369 2602 aaKnown RBP10.52□□□□□ -0.73
C2CD3-219ENST00000542930 CHURC1-FNTBB4DL54 471 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 MAFO75444 373 aaPredicted RBP10.52□□□□□ -0.73
C2CD3-219ENST00000542930 PAPSS2O95340 614 aaPredicted RBP10.52□□□□□ -0.73
C2CD3-219ENST00000542930 MCM5P33992 734 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 FNTBP49356 437 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 SCNN1GP51170 649 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 JAK3P52333 1124 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 SRSF5Q13243 272 aaKnown RBP10.52□□□□□ -0.73
C2CD3-219ENST00000542930 UVSSAQ2YD98 709 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 PABPC1LQ4VXU2 614 aaKnown RBP10.52□□□□□ -0.73
C2CD3-219ENST00000542930 PRR16Q569H4 304 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 CHD1LQ86WJ1 897 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 RAB11FIP4Q86YS3 637 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 SPEM1Q8N4L4 309 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 FAM3CQ92520 227 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 ELSPBP1Q96BH3 223 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 GAD1Q99259 594 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 JPH2Q9BR39 696 aaPredicted RBP10.52□□□□□ -0.73
C2CD3-219ENST00000542930 BRD9Q9H8M2 597 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 RXFP3Q9NSD7 469 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 MIOSQ9NXC5 875 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 DNMT3BQ9UBC3 853 aaKnown RBP10.52□□□□□ -0.73
C2CD3-219ENST00000542930 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 AKAP13Q12802 2813 aa10.52□□□□□ -0.73
C2CD3-219ENST00000542930 WDR81Q562E7 1941 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 SRRM3A6NNA2 597 aaPredicted RBP10.51□□□□□ -0.73
C2CD3-219ENST00000542930 TADA2AO75478 443 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 STBD1O95210 358 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 CHRNB1P11230 501 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 CIITAP33076 1130 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 RING1Q06587 406 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 GAS6Q14393 721 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 RTP2Q5QGT7 225 aa10.51□□□□□ -0.73
C2CD3-219ENST00000542930 TANGO2Q6ICL3 276 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms