RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MS4A14Q96JA4 679 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 FAM84AQ96KN4 292 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 GOLPH3Q9H4A6 298 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 TMEM134Q9H6X4 195 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 KIAA1586Q9HCI6 787 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 PACSIN2Q9UNF0 486 aaPredicted RBP15.32■□□□□ 0.04
LDB3-207ENST00000542786 A0A0B4J269 797 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 KIAA0391O15091 583 aaKnown RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 LIG4P49917 911 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 NLRP11P59045 1033 aaKnown RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 KCTD2Q14681 263 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 IFI16Q16666 785 aaKnown RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 TMEM63BQ5T3F8 832 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 NOP9Q86U38 636 aaKnown RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 ARHGEF26Q96DR7 871 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 FAM167AQ96KS9 214 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 PCDHB18PQ96TA0 734 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 CCDC113Q9H0I3 377 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 ISCUQ9H1K1 167 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 RBM12Q9NTZ6 932 aaKnown RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 MCM3APO60318 1980 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 PTPRJQ12913 1337 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 ZNFX1Q9P2E3 1918 aaKnown RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 UNCXA6NJT0 531 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 ZNF233A6NK53 670 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 ADCY3O60266 1144 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 SGPL1O95470 568 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 TNFAIP3P21580 790 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 HADHBP55084 474 aaKnown RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 ZBTB41Q5SVQ8 909 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 CDCA2Q69YH5 1023 aaPredicted RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 PLPPR4Q7Z2D5 763 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 TRIM50Q86XT4 487 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 DEPTORQ8TB45 409 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 ATP8B4Q8TF62 1192 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 BICD1Q96G01 975 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 MS4A4AQ96JQ5 239 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 ZBTB45Q96K62 511 aaPredicted RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 SUGCTQ9HAC7 445 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 RAB20Q9NX57 234 aa15.31■□□□□ 0.04
LDB3-207ENST00000542786 SUCLA2Q9P2R7 463 aaPredicted RBP15.31■□□□□ 0.04
LDB3-207ENST00000542786 LRRIQ4A6NIV6 560 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 ERLIN1O75477 346 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 CYP2C8P10632 490 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 PLCB4Q15147 1175 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 NT5DC3Q86UY8 548 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 HDAC7Q8WUI4 952 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 BBXQ8WY36 941 aaPredicted RBP15.3■□□□□ 0.04
LDB3-207ENST00000542786 RUBCNQ92622 972 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 NT5C1BQ96P26 610 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 MPHOSPH6Q99547 160 aaKnown RBP15.3■□□□□ 0.04
LDB3-207ENST00000542786 TARS2Q9BW92 718 aaKnown RBP15.3■□□□□ 0.04
LDB3-207ENST00000542786 EFCC1Q9HA90 598 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 TMEM59LQ9UK28 342 aa15.3■□□□□ 0.04
LDB3-207ENST00000542786 AGO2Q9UKV8 859 aaKnown RBP15.3■□□□□ 0.04
LDB3-207ENST00000542786 ANKRD62A6NC57 917 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 K7ERI5 159 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 FAM189A1O60320 539 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 ZC3H11AO75152 810 aaKnown RBP eCLIP15.29■□□□□ 0.04
LDB3-207ENST00000542786 C4BPAP04003 597 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 NOP2P46087 812 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 MFAP3P55082 362 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 STRN3Q13033 797 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 RPS6KA1Q15418 735 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 ZACNQ401N2 412 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 USP37Q86T82 979 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 PPM1KQ8N3J5 372 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 SLC35G2Q8TBE7 412 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 PRPF31Q8WWY3 499 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 COPS5Q92905 334 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 TATDN2Q93075 761 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 HES6Q96HZ4 224 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 LRRC1Q9BTT6 524 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 OSGEPQ9NPF4 335 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.29■□□□□ 0.04
LDB3-207ENST00000542786 ST7Q9NRC1 585 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 COG5Q9UP83 839 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 SLC45A1Q9Y2W3 748 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 CNTNAP2Q9UHC6 1331 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 IQCA1LA6NCM1 817 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 TMCO5BA8MYB1 307 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 ABLIM1O14639 778 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 CYP26A1O43174 497 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 VNN1O95497 513 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 MYBL2P10244 700 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 DLATP10515 647 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 FMO1Q01740 532 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 GCNT1Q02742 428 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms