RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SEPT8Q92599 483 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 P2RX5Q93086 422 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 CPB2Q96IY4 423 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 MFSD14AQ96MC6 490 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 ADAM2Q99965 735 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 GDF15Q99988 308 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 TSPYL2Q9H2G4 693 aaPredicted RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 KIAA1586Q9HCI6 787 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 AGPAT3Q9NRZ7 376 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 C1orf112Q9NSG2 853 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 PRKAG2Q9UGJ0 569 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 DACH1Q9UI36 760 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 CPSF3Q9UKF6 684 aaKnown RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 TTC3P53804 2025 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 LTBP2Q14767 1821 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 BICDL2A1A5D9 508 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 TISP43B9A030 160 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 IKBKBO14920 756 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 CLIC2O15247 247 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 OGTO15294 1046 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 INPPL1O15357 1258 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 EXTL3O43909 919 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 BAIAP3O94812 1187 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 RPL13P26373 211 aaKnown RBP6.41□□□□□ -1.38
ABCF1-207ENST00000542772 GRM5P41594 1212 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 LIG4P49917 911 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 RAB27AP51159 221 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 EPHB4P54760 987 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 CLDN10P78369 228 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 FPGSQ05932 587 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 PAK1Q13153 545 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 ZBTB6Q15916 424 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 DCAF4L1Q3SXM0 396 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 SPATA1Q5VX52 437 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 ZNF365Q70YC5 407 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 HS2ST1Q7LGA3 356 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 ECHDC2Q86YB7 292 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 IRF2BP1Q8IU81 584 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 GPD1LQ8N335 351 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 XXYLT1Q8NBI6 393 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 NELFBQ8WX92 580 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 LINC01599Q8WXQ3 324 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 RSPH1Q8WYR4 309 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 HERVK_113Q902F9 699 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 TOP1MTQ969P6 601 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 CEP63Q96MT8 703 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 SCLT1Q96NL6 688 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 TSPAN18Q96SJ8 248 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 ADPGKQ9BRR6 497 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 CBWD1Q9BRT8 395 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 TCHPQ9BT92 498 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 MKNK1Q9BUB5 465 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 EIF2AQ9BY44 585 aaKnown RBP6.41□□□□□ -1.38
ABCF1-207ENST00000542772 CDT1Q9H211 546 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 PLEKHA5Q9HAU0 1116 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 UBN1Q9NPG3 1134 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 PRDM5Q9NQX1 630 aaPredicted RBP6.41□□□□□ -1.38
ABCF1-207ENST00000542772 FAM105AQ9NUU6 356 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 RNF216Q9NWF9 866 aaPredicted RBP6.41□□□□□ -1.38
ABCF1-207ENST00000542772 AGO2Q9UKV8 859 aaKnown RBP6.41□□□□□ -1.38
ABCF1-207ENST00000542772 PIN4Q9Y237 131 aaKnown RBP6.41□□□□□ -1.38
ABCF1-207ENST00000542772 GIT1Q9Y2X7 761 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 PCDHB2Q9Y5E7 798 aa6.41□□□□□ -1.38
ABCF1-207ENST00000542772 TTC26A0AVF1 554 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 TRIM49BA6NDI0 452 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ZNF233A6NK53 670 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 SMTNL1A8MU46 457 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 HNRNPDLO14979 420 aaKnown RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 CETN3O15182 167 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 MEFVO15553 781 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 FGFR1OPO95684 399 aaKnown RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 NR3C1P04150 777 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 CLTAP09496 248 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 STAG3L1P0CL83 205 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ACTN1P12814 892 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 PRKCSHP14314 528 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ATF7P17544 494 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 SYN1P17600 705 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 PSMC2P35998 433 aaKnown RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 CASP4P49662 377 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ZNF165P49910 485 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 HSP90AA2PQ14568 343 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 SURF1Q15526 300 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 SLC10A6Q3KNW5 377 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ANO6Q4KMQ2 910 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ARMCX5Q6P1M9 558 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 AGMOQ6ZNB7 445 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 LRRC55Q6ZSA7 311 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 C11orf57Q6ZUT1 292 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 APBB1IPQ7Z5R6 666 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 FRMD5Q7Z6J6 570 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 DEFB128Q7Z7B8 93 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 CDR2LQ86X02 465 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 CD302Q8IX05 232 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 DHX40Q8IX18 779 aaKnown RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 TMEM192Q8IY95 271 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 CEP120Q8N960 986 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 GSTCDQ8NEC7 633 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ZSWIM2Q8NEG5 633 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 409.3 ms