RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 MTHFRP42898 656 aa22.35■■□□□ 1.17
DDB1-220ENST00000542337 EFNA5P52803 228 aa22.35■■□□□ 1.17
DDB1-220ENST00000542337 PTPN14Q15678 1187 aa22.35■■□□□ 1.17
DDB1-220ENST00000542337 CABP7Q86V35 215 aa22.35■■□□□ 1.17
DDB1-220ENST00000542337 IGSF22Q8N9C0 903 aa22.35■■□□□ 1.17
DDB1-220ENST00000542337 ZFP42Q96MM3 310 aa22.35■■□□□ 1.17
DDB1-220ENST00000542337 ARIH1Q9Y4X5 557 aaPredicted RBP22.35■■□□□ 1.17
DDB1-220ENST00000542337 ACKR2O00590 384 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 SOD2P04179 222 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 PRKCBP05771 671 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 GJB2P29033 226 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 ATAT1Q5SQI0 421 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 KIAA1841Q6NSI8 718 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 APBB1IPQ7Z5R6 666 aaPredicted RBP22.34■■□□□ 1.17
DDB1-220ENST00000542337 EDAQ92838 391 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 VN1R3Q9BXE9 311 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 MIOSQ9NXC5 875 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 SMC3Q9UQE7 1217 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.34■■□□□ 1.17
DDB1-220ENST00000542337 ZMYM2Q9UBW7 1377 aa22.34■■□□□ 1.17
DDB1-220ENST00000542337 DSC1Q08554 894 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 GRIK3Q13003 919 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 ECM1Q16610 540 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 RARS2Q5T160 578 aaKnown RBP22.33■■□□□ 1.17
DDB1-220ENST00000542337 ELMSAN1Q6PJG2 1045 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 SLC22A17Q8WUG5 538 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 BSNDQ8WZ55 320 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 FAM122AQ96E09 287 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 KLHL5Q96PQ7 755 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 HERC2P3Q9BVR0 1158 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.33■■□□□ 1.17
DDB1-220ENST00000542337 TSHZ2Q9NRE2 1034 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 KLK14Q9P0G3 267 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 DPP7Q9UHL4 492 aa22.33■■□□□ 1.17
DDB1-220ENST00000542337 C2CD2LO14523 706 aa22.32■■□□□ 1.16
DDB1-220ENST00000542337 EPCAMP16422 314 aa22.32■■□□□ 1.16
DDB1-220ENST00000542337 PDZD7Q9H5P4 517 aa22.32■■□□□ 1.16
DDB1-220ENST00000542337 C5orf42Q9H799 3197 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 K7ERI5 159 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 ADH1AP07327 375 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 CNPP09543 421 aaKnown RBP22.31■■□□□ 1.16
DDB1-220ENST00000542337 GLUD2P49448 558 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 DCAF4L1Q3SXM0 396 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 ZBTB33Q86T24 672 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 C12orf76Q8N812 135 aaPredicted RBP22.31■■□□□ 1.16
DDB1-220ENST00000542337 MFSD14AQ96MC6 490 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 FBXL18Q96ME1 805 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 MARCH5Q9NX47 278 aa22.31■■□□□ 1.16
DDB1-220ENST00000542337 CCDC169A6NNP5 214 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 LILRB3O75022 631 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 TADA2AO75478 443 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 ZRSR1Q15695 479 aaKnown RBP22.3■■□□□ 1.16
DDB1-220ENST00000542337 LARP1BQ659C4 914 aaKnown RBP22.3■■□□□ 1.16
DDB1-220ENST00000542337 DRC1Q96MC2 740 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 TBC1D32Q96NH3 1257 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 CCDC113Q9H0I3 377 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 SFXN1Q9H9B4 322 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 POLD4Q9HCU8 107 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 SNTG2Q9NY99 539 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 PHLPP2Q6ZVD8 1323 aa22.3■■□□□ 1.16
DDB1-220ENST00000542337 PP2D1A8MPX8 630 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 E9PMD0 336 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 SP100P23497 879 aaPredicted RBP22.29■■□□□ 1.16
DDB1-220ENST00000542337 CLCN4P51793 760 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 ZXDAP98168 799 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 ATP2C1P98194 919 aaPredicted RBP22.29■■□□□ 1.16
DDB1-220ENST00000542337 DMP1Q13316 513 aaPredicted RBP22.29■■□□□ 1.16
DDB1-220ENST00000542337 KCTD17Q8N5Z5 321 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 GSTCDQ8NEC7 633 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 CDK5RAP3Q96JB5 506 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 KIFC3Q9BVG8 833 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 TIPINQ9BVW5 301 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 KCNG1Q9UIX4 513 aa22.29■■□□□ 1.16
DDB1-220ENST00000542337 THP07101 528 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 CDC25AP30304 524 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 PLA2G5P39877 138 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 PEX3P56589 373 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 DSG1Q02413 1049 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 TUSC3Q13454 348 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 IL17AQ16552 155 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 USP41Q3LFD5 358 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 ATF7IP2Q5U623 682 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 ARL6IP4Q66PJ3 421 aaKnown RBP22.28■■□□□ 1.16
DDB1-220ENST00000542337 TMC5Q6UXY8 1006 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 TRIM67Q6ZTA4 783 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 TAS1R1Q7RTX1 841 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 NT5C3AQ9H0P0 336 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 POMKQ9H5K3 350 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.28■■□□□ 1.16
DDB1-220ENST00000542337 ADAM28Q9UKQ2 775 aa22.28■■□□□ 1.16
DDB1-220ENST00000542337 RBM19Q9Y4C8 960 aaKnown RBP22.28■■□□□ 1.16
DDB1-220ENST00000542337 TTLL13PA6NNM8 815 aa22.27■■□□□ 1.16
DDB1-220ENST00000542337 RECQL4O94761 1208 aa22.27■■□□□ 1.16
DDB1-220ENST00000542337 CD2BP2O95400 341 aaKnown RBP22.27■■□□□ 1.16
DDB1-220ENST00000542337 GLUD1P00367 558 aa22.27■■□□□ 1.16
DDB1-220ENST00000542337 WEE2P0C1S8 567 aa22.27■■□□□ 1.16
DDB1-220ENST00000542337 CREMQ03060 361 aa22.27■■□□□ 1.16
DDB1-220ENST00000542337 HSP90AA2PQ14568 343 aaPredicted RBP22.27■■□□□ 1.16
DDB1-220ENST00000542337 KIAA0319Q5VV43 1072 aa22.27■■□□□ 1.16
DDB1-220ENST00000542337 FUT10Q6P4F1 479 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms