RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 APOL5Q9BWW9 433 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 POMKQ9H5K3 350 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 A0A087WWV3 80 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
VPS33A-206ENST00000542310 PRPHP41219 470 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 OR1G1P47890 313 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 SIGLEC14Q08ET2 396 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 MAPK6Q16659 721 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 RARS2Q5T160 578 aaKnown RBP17.28■□□□□ 0.36
VPS33A-206ENST00000542310 MAEAQ7L5Y9 396 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 CABP7Q86V35 215 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 GSTCDQ8NEC7 633 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 KIFAP3Q92845 792 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 FBXL18Q96ME1 805 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 KLHL5Q96PQ7 755 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 RPS6KC1Q96S38 1066 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 APOL6Q9BWW8 343 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 CCDC113Q9H0I3 377 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 LRWD1Q9UFC0 647 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 PRG3Q9Y2Y8 225 aaPredicted RBP17.28■□□□□ 0.36
VPS33A-206ENST00000542310 MYH11P35749 1972 aa17.28■□□□□ 0.36
VPS33A-206ENST00000542310 TMEM221A6NGB7 291 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 M0R296 226 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 C1RP00736 705 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 PRKCBP05771 671 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 ADH1AP07327 375 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 CNPP09543 421 aaKnown RBP17.27■□□□□ 0.36
VPS33A-206ENST00000542310 GLUD2P49448 558 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 NBR1Q14596 966 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 ELMSAN1Q6PJG2 1045 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 C15orf39Q6ZRI6 1047 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 DEPTORQ8TB45 409 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 BSNDQ8WZ55 320 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 ADPGKQ9BRR6 497 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 COLEC11Q9BWP8 271 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 PDZD7Q9H5P4 517 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 MIOSQ9NXC5 875 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 DPP7Q9UHL4 492 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 USTQ9Y2C2 406 aa17.27■□□□□ 0.36
VPS33A-206ENST00000542310 PHLPP2Q6ZVD8 1323 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 ACKR2O00590 384 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 AKAP5P24588 427 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 KLRC2P26717 231 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
VPS33A-206ENST00000542310 EFNA5P52803 228 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 DSG1Q02413 1049 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 CREMQ03060 361 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 PTGDRQ13258 359 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 PRPF4BQ13523 1007 aaKnown RBP17.26■□□□□ 0.35
VPS33A-206ENST00000542310 DCAF4L1Q3SXM0 396 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 ATAT1Q5SQI0 421 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 TDRD5Q8NAT2 981 aaKnown RBP17.26■□□□□ 0.35
VPS33A-206ENST00000542310 CMASQ8NFW8 434 aaPredicted RBP17.26■□□□□ 0.35
VPS33A-206ENST00000542310 SNX29Q8TEQ0 813 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 IFT74Q96LB3 600 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 RHOBTB2Q9BYZ6 727 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 BHMT2Q9H2M3 363 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
VPS33A-206ENST00000542310 RXFP1Q9HBX9 757 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.26■□□□□ 0.35
VPS33A-206ENST00000542310 CDH22Q9UJ99 828 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 PCDHB6Q9Y5E3 794 aa17.26■□□□□ 0.35
VPS33A-206ENST00000542310 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 SSBP05455 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
VPS33A-206ENST00000542310 MCM2P49736 904 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 ECM1Q16610 540 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 RILPL1Q5EBL4 403 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 FUT10Q6P4F1 479 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 CYP26C1Q6V0L0 522 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 GPR149Q86SP6 731 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 CDR2LQ86X02 465 aaPredicted RBP17.25■□□□□ 0.35
VPS33A-206ENST00000542310 ZDHHC14Q8IZN3 488 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.25■□□□□ 0.35
VPS33A-206ENST00000542310 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 CHST7Q9NS84 486 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
VPS33A-206ENST00000542310 PARP2Q9UGN5 583 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 ADAM28Q9UKQ2 775 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 KIAA1024Q9UPX6 916 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 TRIP11Q15643 1979 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 MYO10Q9HD67 2058 aa17.25■□□□□ 0.35
VPS33A-206ENST00000542310 SF3B1O75533 1304 aaKnown RBP eCLIP17.24■□□□□ 0.35
VPS33A-206ENST00000542310 VWA8A3KMH1 1905 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 PAPLNO95428 1278 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 GLUD1P00367 558 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
VPS33A-206ENST00000542310 TUSC3Q13454 348 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 MTMR3Q13615 1198 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 TMEM132AQ24JP5 1023 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 KIAA0319Q5VV43 1072 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 KRT79Q5XKE5 535 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 CCDC149Q6ZUS6 474 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 APBB1IPQ7Z5R6 666 aaPredicted RBP17.24■□□□□ 0.35
VPS33A-206ENST00000542310 UBALD2Q8IYN6 164 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 PLCD3Q8N3E9 789 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 KCTD17Q8N5Z5 321 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 C12orf76Q8N812 135 aaPredicted RBP17.24■□□□□ 0.35
VPS33A-206ENST00000542310 HDAC7Q8WUI4 952 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 ASIC4Q96FT7 647 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 SORCS3Q9UPU3 1222 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms