RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 KRT31Q15323 416 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 FAM180AQ6UWF9 173 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 ATP11CQ8NB49 1132 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 RFWD2Q8NHY2 731 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 SNF8Q96H20 258 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 OLFM3Q96PB7 478 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 TLR7Q9NYK1 1049 aaKnown RBP11.36□□□□□ -0.59
GABRB3-204ENST00000541819 ZNF229Q9UJW7 825 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 CYP21A2P08686 494 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 NCALDP61601 193 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 CACNB2Q08289 660 aaPredicted RBP11.36□□□□□ -0.59
GABRB3-204ENST00000541819 SPDYAQ5MJ70 313 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 RNF146Q9NTX7 359 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 PSD3Q9NYI0 1048 aa11.36□□□□□ -0.59
GABRB3-204ENST00000541819 ASB14A6NK59 587 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 KBTBD13C9JR72 458 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 HNRNPRO43390 633 aaKnown RBP11.35□□□□□ -0.59
GABRB3-204ENST00000541819 C21orf2O43822 256 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 KRT14P02533 472 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 KRT16P08779 473 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 TPI1P60174 286 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 LRRC74AQ0VAA2 488 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 LAMB3Q13751 1172 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 CEP55Q53EZ4 464 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 BEND6Q5SZJ8 279 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-204ENST00000541819 INTS2Q9H0H0 1204 aaKnown RBP11.35□□□□□ -0.59
GABRB3-204ENST00000541819 LRRIQ3A6PVS8 624 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-204ENST00000541819 SUPT3HB4E1H0 165 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 MFAP3LO75121 409 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 CUL3Q13618 768 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 ARHGEF7Q14155 803 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 TTLL11Q8NHH1 800 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 SLC13A1Q9BZW2 595 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 SWSAP1Q6NVH7 229 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 MTHFD1LQ6UB35 978 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 PODNQ7Z5L7 613 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 ADCK1Q86TW2 530 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 ZBED8Q8IZ13 594 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 PALMDQ9NP74 551 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 BSDC1Q9NW68 430 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-204ENST00000541819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.59
GABRB3-204ENST00000541819 GABBR1Q9UBS5 961 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 WDR62O43379 1518 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 KIF28PB7ZC32 967 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 FAM107AO95990 144 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 DYNC1I2Q13409 638 aaKnown RBP11.35□□□□□ -0.59
GABRB3-204ENST00000541819 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 ENOSF1Q7L5Y1 443 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 TSPAN17Q96FV3 270 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 MPP6Q9NZW5 540 aa11.35□□□□□ -0.59
GABRB3-204ENST00000541819 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 USP17L10C9JJH3 530 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 P4HBP07237 508 aaKnown RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 OOSP2Q86WS3 158 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 RHOT1Q8IXI2 618 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 GPD1LQ8N335 351 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 SNX31Q8N9S9 440 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ZNF507Q8TCN5 953 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 TGS1Q96RS0 853 aaKnown RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ADNPQ9H2P0 1102 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 GOLPH3LQ9H4A5 285 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 CYP4F11Q9HBI6 524 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ABCB6Q9NP58 842 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 AURKCQ9UQB9 309 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 GOLGA8TH3BQL2 631 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ATP9BO43861 1147 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 DEAF1O75398 565 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ADCK5Q3MIX3 580 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ZNF513Q8N8E2 541 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 PGBD4Q96DM1 585 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 PUS7LQ9H0K6 701 aaKnown RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 WNT8AQ9H1J5 351 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 UNC45AQ9H3U1 944 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ZSWIM5Q9P217 1185 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 DCTN4Q9UJW0 460 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 INSRP06213 1382 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 CYP2D7A0A087X1C5 515 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 NKX1-1Q15270 411 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 PID1Q7Z2X4 250 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 SH3RF3Q8TEJ3 882 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-204ENST00000541819 FAM20AQ96MK3 541 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ACAD9Q9H845 621 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 PARVAQ9NVD7 372 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 EHD2Q9NZN4 543 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 PLD3Q8IV08 490 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 KIZQ2M2Z5 673 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 BBS7Q8IWZ6 715 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 KIRREL3Q8IZU9 778 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 MAN1C1Q9NR34 630 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
GABRB3-204ENST00000541819 ECE2O60344 883 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 QARSP47897 775 aaKnown RBP11.33□□□□□ -0.6
GABRB3-204ENST00000541819 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms