RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 MIS18BP1Q6P0N0 1132 aa10.99□□□□□ -0.65
CHFR-220ENST00000541817 COLGALT2Q8IYK4 626 aa10.99□□□□□ -0.65
CHFR-220ENST00000541817 DEFB124Q8NES8 71 aa10.99□□□□□ -0.65
CHFR-220ENST00000541817 HNRNPLLQ8WVV9 542 aaKnown RBP10.99□□□□□ -0.65
CHFR-220ENST00000541817 GCOM2Q9BZD3 368 aaPredicted RBP10.99□□□□□ -0.65
CHFR-220ENST00000541817 CHST12Q9NRB3 414 aa10.99□□□□□ -0.65
CHFR-220ENST00000541817 GABBR1Q9UBS5 961 aa10.99□□□□□ -0.65
CHFR-220ENST00000541817 STK39Q9UEW8 545 aa10.99□□□□□ -0.65
CHFR-220ENST00000541817 PIAS3Q9Y6X2 628 aa10.99□□□□□ -0.65
CHFR-220ENST00000541817 COL4A2P08572 1712 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 WDR81Q562E7 1941 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
CHFR-220ENST00000541817 ADAM12O43184 909 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 ZNF623O75123 536 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 PLEKHA8P1O95397 391 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 SKIP12755 728 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 CEBPBP17676 345 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 RAP1GAPP47736 663 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 TROAPQ12815 778 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 SLC5A9Q2M3M2 681 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 UAP1L1Q3KQV9 507 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 PABPC1LQ4VXU2 614 aaKnown RBP10.98□□□□□ -0.65
CHFR-220ENST00000541817 WDR5BQ86VZ2 330 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 CHD1LQ86WJ1 897 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 LURAP1LQ8IV03 231 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 KSR1Q8IVT5 923 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 SPEM1Q8N4L4 309 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 RILPL2Q969X0 211 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 PGBD4Q96DM1 585 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 SH2D3AQ9BRG2 576 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 LY9Q9HBG7 655 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 CHST7Q9NS84 486 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 FBXW11Q9UKB1 542 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 MRPS23Q9Y3D9 190 aaKnown RBP10.98□□□□□ -0.65
CHFR-220ENST00000541817 MAFBQ9Y5Q3 323 aaPredicted RBP10.98□□□□□ -0.65
CHFR-220ENST00000541817 SALL3Q9BXA9 1300 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 SPAG17Q6Q759 2223 aa10.98□□□□□ -0.65
CHFR-220ENST00000541817 PDCD11Q14690 1871 aaKnown RBP10.98□□□□□ -0.65
CHFR-220ENST00000541817 DHX15O43143 795 aaKnown RBP10.97□□□□□ -0.65
CHFR-220ENST00000541817 CCDC192P0DO97 292 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 GDI1P31150 447 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 SOX9P48436 509 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 PTGDRQ13258 359 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 NFKBIBQ15653 356 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
CHFR-220ENST00000541817 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 LIN9Q5TKA1 542 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 ANKRD45Q5TZF3 282 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 FUT10Q6P4F1 479 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 CATSPER4Q7RTX7 472 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 CACNA2D4Q7Z3S7 1137 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 PROSER1Q86XN7 944 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 CCDC82Q8N4S0 544 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 TTC8Q8TAM2 541 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 SLC7A14Q8TBB6 771 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 GAB3Q8WWW8 586 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 LRIG1Q96JA1 1093 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 MBOAT7Q96N66 472 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 TRAIPQ9BWF2 469 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 ZNF334Q9HCZ1 680 aaPredicted RBP10.97□□□□□ -0.65
CHFR-220ENST00000541817 POLR3BQ9NW08 1133 aaPredicted RBP10.97□□□□□ -0.65
CHFR-220ENST00000541817 FNIP2Q9P278 1114 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 SEC63Q9UGP8 760 aaKnown RBP10.97□□□□□ -0.65
CHFR-220ENST00000541817 MSRB2Q9Y3D2 182 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 NEUROG3Q9Y4Z2 214 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 EML5Q05BV3 1969 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 IGSF10Q6WRI0 2623 aa10.97□□□□□ -0.65
CHFR-220ENST00000541817 LAMA5O15230 3695 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 F5P12259 2224 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 TDRD15B5MCY1 1934 aaKnown RBP10.96□□□□□ -0.65
CHFR-220ENST00000541817 SPAARA0A1B0GVQ0 90 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 TMEM150BA6NC51 233 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 EXTL3O43909 919 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 ZNF862O60290 1169 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 XYLBO75191 536 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 RPP40O75818 363 aaKnown RBP10.96□□□□□ -0.65
CHFR-220ENST00000541817 FCARP24071 287 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 ZNF76P36508 570 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 SCNN1GP51170 649 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 USP41Q3LFD5 358 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 RTP2Q5QGT7 225 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 DAB2IPQ5VWQ8 1189 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 LARP1BQ659C4 914 aaKnown RBP10.96□□□□□ -0.65
CHFR-220ENST00000541817 CWC27Q6UX04 472 aaKnown RBP10.96□□□□□ -0.65
CHFR-220ENST00000541817 MRPL10Q7Z7H8 261 aaKnown RBP10.96□□□□□ -0.65
CHFR-220ENST00000541817 PLA2G4DQ86XP0 818 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 RAB11FIP4Q86YS3 637 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 SRBD1Q8N5C6 995 aaKnown RBP10.96□□□□□ -0.65
CHFR-220ENST00000541817 HASPINQ8TF76 798 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 DNASE1L2Q92874 299 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 ELSPBP1Q96BH3 223 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 LOXL4Q96JB6 756 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 GAD1Q99259 594 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 CLSTN3Q9BQT9 956 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 IER2Q9BTL4 223 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 MKNK1Q9BUB5 465 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 TRMT61BQ9BVS5 477 aaKnown RBP10.96□□□□□ -0.65
CHFR-220ENST00000541817 C22orf23Q9BZE7 217 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms