RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.3■■■□□ 2.44
CCM2-218ENST00000541586 SCP2P22307 547 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 TRAF7Q6Q0C0 670 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 PPFIBP1Q86W92 1011 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 FAM186BQ8IYM0 893 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 BORCS6Q96GS4 357 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 ERGIC2Q96RQ1 377 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 CBWD1Q9BRT8 395 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 OSBPL7Q9BZF2 842 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 IFT122Q9HBG6 1241 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 FRMD4BQ9Y2L6 1034 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 ANKRD63C9JTQ0 380 aa30.29■■■□□ 2.44
CCM2-218ENST00000541586 SYCP1Q15431 976 aa30.29■■■□□ 2.44
CCM2-218ENST00000541586 FAM26DQ5JW98 314 aa30.29■■■□□ 2.44
CCM2-218ENST00000541586 ZNF410Q86VK4 478 aa30.29■■■□□ 2.44
CCM2-218ENST00000541586 TMEM40Q8WWA1 233 aa30.29■■■□□ 2.44
CCM2-218ENST00000541586 GCOM2Q9BZD3 368 aaPredicted RBP30.29■■■□□ 2.44
CCM2-218ENST00000541586 PCIF1Q9H4Z3 704 aa30.29■■■□□ 2.44
CCM2-218ENST00000541586 EXOC3O60645 756 aa30.28■■■□□ 2.44
CCM2-218ENST00000541586 GYPCP04921 128 aa30.28■■■□□ 2.44
CCM2-218ENST00000541586 GHRP10912 638 aa30.28■■■□□ 2.44
CCM2-218ENST00000541586 NR2E3Q9Y5X4 410 aa30.28■■■□□ 2.44
CCM2-218ENST00000541586 PHKA2P46019 1235 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 ADKP55263 362 aaKnown RBP30.27■■■□□ 2.44
CCM2-218ENST00000541586 DEFB128Q7Z7B8 93 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 TC2NQ8N9U0 490 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 CPLX3Q8WVH0 158 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 HSPBP1Q9NZL4 362 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 FGFR4P22455 802 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 EIF4BP23588 611 aaKnown RBP30.27■■■□□ 2.44
CCM2-218ENST00000541586 MSNP26038 577 aaKnown RBP30.27■■■□□ 2.44
CCM2-218ENST00000541586 ADSSP30520 456 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 CCZ1BP86790 482 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 CCZ1P86791 482 aaPredicted RBP30.27■■■□□ 2.44
CCM2-218ENST00000541586 TRIM14Q14142 442 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 MBTPS1Q14703 1052 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 SLC39A4Q6P5W5 647 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 ZNF710Q8N1W2 664 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 BADQ92934 168 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 MINDY3Q9H8M7 445 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 PYCARDQ9ULZ3 195 aa30.27■■■□□ 2.44
CCM2-218ENST00000541586 AKR1B15C9JRZ8 316 aaPredicted RBP30.26■■■□□ 2.43
CCM2-218ENST00000541586 INO80B-WBP1J3KQ70 363 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 K7ERI5 159 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 CASP14P31944 242 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 RGS19P49795 217 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 KLK7P49862 253 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 PTENP60484 403 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 PPP2R3AQ06190 1150 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 KCNH2Q12809 1159 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 STRN3Q13033 797 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 FBXO47Q5MNV8 452 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 ZBTB8OSQ8IWT0 167 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 INO80BQ9C086 356 aaPredicted RBP30.26■■■□□ 2.43
CCM2-218ENST00000541586 TMEM134Q9H6X4 195 aa30.26■■■□□ 2.43
CCM2-218ENST00000541586 NOC2LQ9Y3T9 749 aaKnown RBP30.26■■■□□ 2.43
CCM2-218ENST00000541586 SIP14410 1827 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 HNRNPDLO14979 420 aaKnown RBP30.25■■■□□ 2.43
CCM2-218ENST00000541586 DARSP14868 501 aaKnown RBP30.25■■■□□ 2.43
CCM2-218ENST00000541586 MFSD5Q6N075 450 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 TMEM199Q8N511 208 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 XXYLT1Q8NBI6 393 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 BICD1Q96G01 975 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 SIK3Q9Y2K2 1263 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 NBNO60934 754 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 RPS6KA5O75582 802 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 SKILP12757 684 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 CSF2RAP15509 400 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 FXR1P51114 621 aaKnown RBP eCLIP30.25■■■□□ 2.43
CCM2-218ENST00000541586 NFX1Q12986 1120 aaKnown RBP30.25■■■□□ 2.43
CCM2-218ENST00000541586 LPIN1Q14693 890 aa30.25■■■□□ 2.43
CCM2-218ENST00000541586 CDCA2Q69YH5 1023 aaPredicted RBP30.25■■■□□ 2.43
CCM2-218ENST00000541586 PHLPP2Q6ZVD8 1323 aa30.24■■■□□ 2.43
CCM2-218ENST00000541586 TPM1P09493 284 aa30.24■■■□□ 2.43
CCM2-218ENST00000541586 POU5F1BQ06416 359 aa30.24■■■□□ 2.43
CCM2-218ENST00000541586 DCAF17Q5H9S7 520 aaPredicted RBP30.24■■■□□ 2.43
CCM2-218ENST00000541586 RDH13Q8NBN7 331 aa30.24■■■□□ 2.43
CCM2-218ENST00000541586 SLC35C1Q96A29 364 aa30.24■■■□□ 2.43
CCM2-218ENST00000541586 PCMTD1Q96MG8 357 aaPredicted RBP30.24■■■□□ 2.43
CCM2-218ENST00000541586 AGO3Q9H9G7 860 aaKnown RBP30.24■■■□□ 2.43
CCM2-218ENST00000541586 MFAP3LO75121 409 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 CD52P31358 61 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 EFNA5P52803 228 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 GPNMBQ14956 572 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 TCERG1LQ5VWI1 586 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 SRGAP1Q7Z6B7 1085 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 ZSWIM2Q8NEG5 633 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 C2orf40Q9H1Z8 148 aa30.23■■■□□ 2.43
CCM2-218ENST00000541586 RNF225M0QZC1 329 aaPredicted RBP30.22■■■□□ 2.43
CCM2-218ENST00000541586 AFPP02771 609 aaKnown RBP30.22■■■□□ 2.43
CCM2-218ENST00000541586 CNGA4Q8IV77 575 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 TMX1Q9H3N1 280 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 USP20Q9Y2K6 914 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 PIGRP01833 764 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 LIG4P49917 911 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 TSHZ1Q6ZSZ6 1077 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 CATSPER4Q7RTX7 472 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 FAM228AQ86W67 206 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 POMGNT1Q8WZA1 660 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 LBHD1Q9BQE6 289 aaPredicted RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms