RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 A0A088AWK7 358 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 CCDC196A0A1B0GTZ2 297 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 CCDC66A2RUB6 948 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 FYB1O15117 783 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 GSTA4O15217 222 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 ZNF862O60290 1169 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 DOK2O60496 412 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 IL18RAPO95256 599 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 HSPA4LO95757 839 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 APOA4P06727 396 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 ADRB2P07550 413 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 SLC3A2P08195 630 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 IL11P20809 199 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 TRPC3Q13507 836 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 CUL4AQ13619 759 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 IKBKEQ14164 716 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 PDE3AQ14432 1141 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 LBRQ14739 615 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 KIF4BQ2VIQ3 1234 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 HSP90AB3PQ58FF7 597 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 ANKRD45Q5TZF3 282 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 CEP135Q66GS9 1140 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 TATDN1Q6P1N9 297 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 KDELC2Q7Z4H8 507 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 NME9Q86XW9 330 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.19□□□□□ -1.42
DDB1-219ENST00000541513 TRMT2AQ8IZ69 625 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 C2orf69Q8N8R5 385 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 MARCH10Q8NA82 808 aaPredicted RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 ATG16L2Q8NAA4 619 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 TDRD7Q8NHU6 1098 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 TGFBRAP1Q8WUH2 860 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 CYB5D2Q8WUJ1 264 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 ANKS1AQ92625 1134 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 NSUN4Q96CB9 384 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 MAELQ96JY0 434 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 MSLNLQ96KJ4 702 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 MRGPRX2Q96LB1 330 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 CNPPD1Q9BV87 410 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 AGXT2Q9BYV1 514 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 MKRN2Q9H000 416 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 CCDC86Q9H6F5 360 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 PRDM5Q9NQX1 630 aaPredicted RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 LRFN1Q9P244 771 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 TBC1D29Q9UFV1 150 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 HERC5Q9UII4 1024 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 VPS28Q9UK41 221 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 ZHX1Q9UKY1 873 aaPredicted RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 KNSTRNQ9Y448 316 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 PASKQ96RG2 1323 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 NRAPQ86VF7 1730 aa6.19□□□□□ -1.42
DDB1-219ENST00000541513 CPDO75976 1380 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 LMO7Q8WWI1 1683 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 PI4KAP2A4QPH2 592 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 LGALS16A8MUM7 142 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 DCDC2CA8MYV0 355 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 ZBTB42B2RXF5 422 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 INO80B-WBP1J3KQ70 363 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 J3QW42 95 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 IPO5O00410 1097 aaKnown RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 APOL1O14791 398 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 ALDH1A1P00352 501 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 GHRHP01286 108 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 SRGAP2CP0DJJ0 459 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 HARSP12081 509 aaKnown RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 TIMP2P16035 220 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 ALOX15P16050 662 aaPredicted RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 ALAS2P22557 587 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 HOXD13P35453 343 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 SLC16A1P53985 500 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 ZNF445P59923 1031 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 ETF1P62495 437 aaKnown RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 LACTBP83111 547 aaPredicted RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 SPEM2Q0P670 501 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 MTA1Q13330 715 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 MOGSQ13724 837 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 ERV3-1Q14264 604 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 KRT32Q14532 448 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 NBPF12Q5TAG4 269 aaPredicted RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 NUTM2GQ5VZR2 741 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 RPUSD3Q6P087 351 aaKnown RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 C16orf59Q7L2K0 433 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 GALNTL5Q7Z4T8 443 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 PPIL6Q8IXY8 311 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 RTKN2Q8IZC4 609 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 CYP4X1Q8N118 509 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 KCNH5Q8NCM2 988 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 RNF217Q8TC41 542 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 COG3Q96JB2 828 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 TSEN34Q9BSV6 310 aaKnown RBP6.18□□□□□ -1.42
DDB1-219ENST00000541513 MS4A5Q9H3V2 200 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 ZMAT4Q9H898 229 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 SPON1Q9HCB6 807 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 DIAPH3Q9NSV4 1193 aa6.18□□□□□ -1.42
DDB1-219ENST00000541513 C17orf113A0A1B0GUU1 675 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 STARD3NLO95772 234 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 GCP02774 474 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 SNRPBP14678 240 aaKnown RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 EEF1GP26641 437 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms