RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 ULK1O75385 1050 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 CTSSP25774 331 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 PTGS2P35354 604 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 FAM189BP81408 668 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 VPS72Q15906 364 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 CCDC178Q5BJE1 867 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 DCAF17Q5H9S7 520 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-210ENST00000541488 IQSEC1Q6DN90 963 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 LHFPL2Q6ZUX7 228 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 HTR3DQ70Z44 454 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 MRGPREQ86SM8 312 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 VRK3Q8IV63 474 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 SYNE4Q8N205 404 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 LILRA3Q8N6C8 439 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-210ENST00000541488 REPS2Q8NFH8 660 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 SNX33Q8WV41 574 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 CEP95Q96GE4 821 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 CAAP1Q9H8G2 361 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 RECQL4O94761 1208 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 KRT4P19013 534 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 CNGA1P29973 690 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 SOX5P35711 763 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 SESN3P58005 492 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 FSCN1Q16658 493 aaKnown RBP5.48□□□□□ -1.53
PRKDC-210ENST00000541488 RPUSD2Q8IZ73 545 aaKnown RBP5.48□□□□□ -1.53
PRKDC-210ENST00000541488 OR52N2Q8NGI0 321 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 PROKR1Q8TCW9 393 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 CHAC2Q8WUX2 184 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 PHACTR3Q96KR7 559 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 TEX101Q9BY14 249 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 GPRC5DQ9NZD1 345 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 POGKQ9P215 609 aa5.48□□□□□ -1.53
PRKDC-210ENST00000541488 APOBEC2Q9Y235 224 aaKnown RBP5.48□□□□□ -1.53
PRKDC-210ENST00000541488 AHRRA9YTQ3 701 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 AKR1B10O60218 316 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 ZEB2O60315 1214 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 LPXNO60711 386 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 RAMP2O60895 175 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 ENPP1P22413 925 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 PTPN7P35236 360 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 MASP1P48740 699 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 WNT3AP56704 352 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 RNASE9P60153 205 aaKnown RBP5.47□□□□□ -1.53
PRKDC-210ENST00000541488 TOR2AQ5JU69 321 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 PRAMEF14Q5SWL7 426 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 NAIF1Q69YI7 327 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-210ENST00000541488 KCNV1Q6PIU1 500 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 MRGPRGQ86SM5 289 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 GLCCI1Q86VQ1 547 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 RSAD2Q8WXG1 361 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 AGAP2Q99490 1192 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 NDC1Q9BTX1 674 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 KCNH6Q9H252 994 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 DMRT3Q9NQL9 472 aa5.47□□□□□ -1.53
PRKDC-210ENST00000541488 NCR1O76036 304 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 ABHD16AO95870 558 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 PEX11BO96011 259 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 HSD3B2P26439 372 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 ZFP36P26651 326 aaKnown RBP5.46□□□□□ -1.54
PRKDC-210ENST00000541488 NHLH2Q02577 135 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 STAT4Q14765 748 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 TIGD2Q4W5G0 525 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 MFSD14BQ5SR56 506 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 LAIR1Q6GTX8 287 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 Q6ZPA2 131 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 SYT12Q8IV01 421 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 OR10H5Q8NGA6 315 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 COG1Q8WTW3 980 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 RIN2Q8WYP3 895 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-210ENST00000541488 TFAP2CQ92754 450 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 ACAP3Q96P50 834 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-210ENST00000541488 C14orf119Q9NWQ9 140 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 ANKFY1Q9P2R3 1169 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 DMRT1Q9Y5R6 373 aa5.46□□□□□ -1.54
PRKDC-210ENST00000541488 ZNF185O15231 689 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 KRTAP10-11P60412 298 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 RAP2BP61225 183 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 SRSF2Q01130 221 aaKnown RBP5.45□□□□□ -1.54
PRKDC-210ENST00000541488 MBNL2Q5VZF2 373 aaKnown RBP5.45□□□□□ -1.54
PRKDC-210ENST00000541488 EFCAB12Q6NXP0 572 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 DOK3Q7L591 496 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 GDF7Q7Z4P5 450 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 AFAP1L2Q8N4X5 818 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 SLC35B2Q8TB61 432 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 TSPEARQ8WU66 669 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 ZNF480Q8WV37 535 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 STON2Q8WXE9 905 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 PDCD2LQ9BRP1 358 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 LDAHQ9H6V9 325 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 RPTORQ8N122 1335 aa5.45□□□□□ -1.54
PRKDC-210ENST00000541488 UNC119BA6NIH7 251 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 WNT10BO00744 389 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 TRIM24O15164 1050 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 NDUFA10O95299 355 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 ITGB1P05556 798 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 OSMP13725 252 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 LAG3P18627 525 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 MEF2AQ02078 507 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms