RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PRKCIP41743 596 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 PEX3P56589 373 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 SOX10P56693 466 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 PPARDQ03181 441 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 HLTFQ14527 1009 aaKnown RBP eCLIP18.54■□□□□ 0.562e-7■□□□□ 8.5
SPIDR-227ENST00000541342 C10orf76Q5T2E6 689 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 HS2ST1Q7LGA3 356 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 SLFN11Q7Z7L1 901 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.54■□□□□ 0.567e-7■■■■■ 70.8
SPIDR-227ENST00000541342 ATP6V0A1Q93050 837 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 PBKQ96KB5 322 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 SLC12A6Q9UHW9 1150 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 IQCA1LA6NCM1 817 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 CUL1Q13616 776 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 TCERG1LQ5VWI1 586 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 GJB7Q6PEY0 223 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 SYCP3Q8IZU3 236 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 HPDP32754 393 aaPredicted RBP18.53■□□□□ 0.56
SPIDR-227ENST00000541342 NCKAP1LP55160 1127 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 EXOC3L4Q17RC7 722 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 LRIG3Q6UXM1 1119 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 CEP170P1Q96L14 293 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 FGD4Q96M96 766 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 SYNGAP1Q96PV0 1343 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 MYO1FO00160 1098 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 SLC16A4O15374 487 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 FSBPO95073 299 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 GTF2BQ00403 316 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 PRKCEQ02156 737 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 HAUS6Q7Z4H7 955 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 CALR3Q96L12 384 aaKnown RBP18.53■□□□□ 0.56
SPIDR-227ENST00000541342 SPAG5Q96R06 1193 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.53■□□□□ 0.561e-7■■□□□ 11.5
SPIDR-227ENST00000541342 IGSF9BQ9UPX0 1349 aa18.53■□□□□ 0.56
SPIDR-227ENST00000541342 ZNFX1Q9P2E3 1918 aaKnown RBP18.53■□□□□ 0.56
SPIDR-227ENST00000541342 PGRMC1O00264 195 aaKnown RBP18.52■□□□□ 0.56
SPIDR-227ENST00000541342 PGK2P07205 417 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 FASTKD5Q7L8L6 764 aaKnown RBP18.52■□□□□ 0.56
SPIDR-227ENST00000541342 BSNDQ8WZ55 320 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 MKNK1Q9BUB5 465 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 ST6GALNAC4Q9H4F1 302 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 CAPN7Q9Y6W3 813 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 DDX3XO00571 662 aaKnown RBP eCLIP18.52■□□□□ 0.56
SPIDR-227ENST00000541342 ATP4AP20648 1035 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 MAP1SQ66K74 1059 aaPredicted RBP18.52■□□□□ 0.56
SPIDR-227ENST00000541342 MIS18BP1Q6P0N0 1132 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 OTUD6AQ7L8S5 288 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 YTHDF3Q7Z739 585 aaKnown RBP18.52■□□□□ 0.56
SPIDR-227ENST00000541342 SLC9A9Q8IVB4 645 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 RASGEF1CQ8N431 466 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 KIFC3Q9BVG8 833 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 PDLIM7Q9NR12 457 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 AMACRQ9UHK6 382 aa18.52■□□□□ 0.56
SPIDR-227ENST00000541342 BZW2Q9Y6E2 419 aaKnown RBP18.52■□□□□ 0.56
SPIDR-227ENST00000541342 ATG7O95352 703 aa18.52■□□□□ 0.55
SPIDR-227ENST00000541342 FAM107AO95990 144 aa18.52■□□□□ 0.55
SPIDR-227ENST00000541342 UBA1P22314 1058 aaKnown RBP18.52■□□□□ 0.55
SPIDR-227ENST00000541342 ALCAMQ13740 583 aa18.52■□□□□ 0.55
SPIDR-227ENST00000541342 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.55
SPIDR-227ENST00000541342 SEPT9Q9UHD8 586 aaPredicted RBP18.52■□□□□ 0.55
SPIDR-227ENST00000541342 C6orf89Q6UWU4 347 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 ACCSQ96QU6 501 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 TMEM206Q9H813 350 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 ZNF408Q9H9D4 720 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 DCDC2CA8MYV0 355 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 SLC25A27O95847 323 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 NT5DC3Q86UY8 548 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 SPATS2Q86XZ4 545 aaKnown RBP18.51■□□□□ 0.55
SPIDR-227ENST00000541342 ZSWIM2Q8NEG5 633 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 SEC14L1Q92503 715 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 XPNPEP1Q9NQW7 623 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 FBXL5Q9UKA1 691 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 CLEC11AQ9Y240 323 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 MCM3APO60318 1980 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 DAPK3O43293 454 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 MYZAPP0CAP1 466 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 OSBPP22059 807 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 NPTX2P47972 431 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 OTUD6BQ8N6M0 293 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 TMEM161BQ8NDZ6 487 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 CBWD1Q9BRT8 395 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 CENPHQ9H3R5 247 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 PCIF1Q9H4Z3 704 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 CYP26B1Q9NR63 512 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 CNOT8Q9UFF9 292 aaKnown RBP18.51■□□□□ 0.55
SPIDR-227ENST00000541342 FRMD4BQ9Y2L6 1034 aa18.51■□□□□ 0.55
SPIDR-227ENST00000541342 E7EVH7 732 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 SOCS7O14512 581 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 CTNNA1P35221 906 aaKnown RBP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 EEPD1Q7L9B9 569 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 CELF4Q9BZC1 486 aaKnown RBP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 NR2E1Q9Y466 385 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 MAFBQ9Y5Q3 323 aaPredicted RBP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 KRIT1O00522 736 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 DKC1O60832 514 aaKnown RBP eCLIP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 FARP2O94887 1054 aaPredicted RBP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 POU5F1Q01860 360 aaKnown RBP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 SNAPC2Q13487 334 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms