RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ATP2A1O14983 1001 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 COPB2P35606 906 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 PSMC4P43686 418 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 TNNC1P63316 161 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 NOGQ13253 232 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 FAM133BQ5BKY9 247 aaKnown RBP15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 CYFIP1Q7L576 1253 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 DAAM2Q86T65 1068 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 TRIM50Q86XT4 487 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 TRIM59Q8IWR1 403 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 DNM3Q9UQ16 869 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 IVNS1ABPQ9Y6Y0 642 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 IPO5O00410 1097 aaKnown RBP15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 AP3B2Q13367 1082 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 PEX26Q7Z412 305 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 CPLX4Q7Z7G2 160 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 TBC1D1Q86TI0 1168 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 CATSPER3Q86XQ3 398 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 RNF10Q8N5U6 811 aaKnown RBP15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 PLCD4Q9BRC7 762 aa15.44■□□□□ 0.06
SFSWAP-210ENST00000541286 KRIT1O00522 736 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 TBCAO75347 108 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 UCHL3P15374 230 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 PRLRP16471 622 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 SKOR1P84550 965 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 SNX1Q13596 522 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 CD99L2Q8TCZ2 262 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 NSUN6Q8TEA1 469 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 PIK3R5Q8WYR1 880 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 REEP2Q9BRK0 252 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 FAM167BQ9BTA0 163 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 AMACRQ9UHK6 382 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 CASP8AP2Q9UKL3 1982 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 TNPO2O14787 897 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 PPP1R12AO14974 1030 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 BUB1BO60566 1050 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 CCNE2O96020 404 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 SARNPP82979 210 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 EGFL6Q8IUX8 553 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 MICAL1Q8TDZ2 1067 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 MXRA8Q9BRK3 442 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 CELF4Q9BZC1 486 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 UNC45AQ9H3U1 944 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 PJA2O43164 708 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 ITGA4P13612 1032 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 ADCYAP1R1P41586 468 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 OAZ1P54368 228 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 ARHGAP44Q17R89 818 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 FAM110CQ1W6H9 321 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 ZCWPW2Q504Y3 356 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 ARSHQ5FYA8 562 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 ALS2CLQ60I27 953 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 PPP4R3AQ6IN85 833 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 TPH2Q8IWU9 490 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 UHMK1Q8TAS1 419 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 NSMCE1Q8WV22 266 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 CHORDC1Q9UHD1 332 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-210ENST00000541286 KDM3AQ9Y4C1 1321 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 AKAP3O75969 853 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 KIF4AO95239 1232 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 LCA5LO95447 670 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 SCTRP47872 440 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 PRKCZQ05513 592 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 UGCGQ16739 394 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 CHST13Q8NET6 341 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 ZFYVE28Q9HCC9 887 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 KCNMB3Q9NPA1 279 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 NOVA2Q9UNW9 492 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 MYPNQ86TC9 1320 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 TMEM110-MUSTN1A8MSY1 372 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 AP1G2O75843 785 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 FAM107AO95990 144 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 AFPP02771 609 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 CTNNA1P35221 906 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 TM4SF4P48230 202 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 CYP2J2P51589 502 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 SPIRE1Q08AE8 756 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 MEI1Q5TIA1 1274 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 ATP6V1G3Q96LB4 118 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 NUCKS1Q9H1E3 243 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 CNOT8Q9UFF9 292 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 RPTORQ8N122 1335 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 ADGRA2Q96PE1 1338 aa15.42■□□□□ 0.06
SFSWAP-210ENST00000541286 GAS7O60861 476 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 ZC2HC1CQ53FD0 456 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 USP38Q8NB14 1042 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 SEC16BQ96JE7 1060 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 CEP63Q96MT8 703 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 DAPK3O43293 454 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 CA12O43570 354 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 LRRN2O75325 713 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 GNA14O95837 355 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 FOSP01100 380 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 SOX10P56693 466 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms