RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 PPP2R5AQ15172 486 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 TAF2Q6P1X5 1199 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 RPAINQ86UA6 219 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 SYCP3Q8IZU3 236 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 KIF18AQ8NI77 898 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 DNAJB3Q8WWF6 145 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 IFT74Q96LB3 600 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 NFKBIZQ9BYH8 718 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 FAM49AQ9H0Q0 323 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-204ENST00000540846 KMT5AQ9NQR1 393 aa13.59□□□□□ -0.23
SMAD3-204ENST00000540846 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.23
SMAD3-204ENST00000540846 LRRIQ4A6NIV6 560 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 CCDC169A6NNP5 214 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 RIOK3O14730 519 aaKnown RBP13.58□□□□□ -0.23
SMAD3-204ENST00000540846 ASAP2O43150 1006 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 B4GALT4O60513 344 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 NOL4O94818 638 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 NDUFA10O95299 355 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 GTF2F1P35269 517 aaKnown RBP eCLIP13.58□□□□□ -0.231e-7■■■□□ 15.5
SMAD3-204ENST00000540846 SMTNP53814 917 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 PTENP60484 403 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 PTGISQ16647 500 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 PDXDC1Q6P996 788 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 UBE2Q1Q7Z7E8 422 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 MAP4K3Q8IVH8 894 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 CCDC170Q8IYT3 715 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 RNF149Q8NC42 400 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 ZNF592Q92610 1267 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 ZNF668Q96K58 619 aaPredicted RBP13.58□□□□□ -0.23
SMAD3-204ENST00000540846 MAP7D2Q96T17 732 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 LSM14BQ9BX40 385 aaKnown RBP13.58□□□□□ -0.23
SMAD3-204ENST00000540846 TRPV6Q9H1D0 765 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 MINDY3Q9H8M7 445 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 CDHR5Q9HBB8 845 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 PLCB1Q9NQ66 1216 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 AKT3Q9Y243 479 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 FRMD4BQ9Y2L6 1034 aa13.58□□□□□ -0.23
SMAD3-204ENST00000540846 EPN1Q9Y6I3 576 aaPredicted RBP13.58□□□□□ -0.23
SMAD3-204ENST00000540846 A0A087WZ62 844 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 UQCRHLA0A096LP55 91 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 DENND3A2RUS2 1198 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 RBAK-RBAKDNI3L0D1 243 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 CD4P01730 458 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 UQCRHP07919 91 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 IQCF3P0C7M6 154 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 CYP2J2P51589 502 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 NLRP11P59045 1033 aaKnown RBP13.58□□□□□ -0.24
SMAD3-204ENST00000540846 PTK7Q13308 1070 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-204ENST00000540846 DPY19L2P1Q6NXN4 242 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 SYT10Q6XYQ8 523 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 ZNF410Q86VK4 478 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 ACRBPQ8NEB7 543 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-204ENST00000540846 VTI1AQ96AJ9 217 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 NLRP4Q96MN2 994 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 FDXACB1Q9BRP7 624 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-204ENST00000540846 SEZ6LQ9BYH1 1024 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
SMAD3-204ENST00000540846 GANQ9H2C0 597 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
SMAD3-204ENST00000540846 REXO2Q9Y3B8 237 aaKnown RBP13.58□□□□□ -0.24
SMAD3-204ENST00000540846 LRRC53A6NM62 1247 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 MAPK13O15264 365 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 SRGAP2CP0DJJ0 459 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 CAPN2P17655 700 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 SCP2P22307 547 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 ABCD1P33897 745 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 CYLC1P35663 651 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-204ENST00000540846 MBTD1Q05BQ5 628 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 MGAT3Q09327 533 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 TMEM62Q0P6H9 643 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 AMHR2Q16671 573 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 C1orf53Q5VUE5 145 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 SLC39A4Q6P5W5 647 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 CACNA2D4Q7Z3S7 1137 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 DEPTORQ8TB45 409 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 TMEM40Q8WWA1 233 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 PPP1R16BQ96T49 567 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 CRACR2AQ9BSW2 395 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 SENP6Q9GZR1 1112 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-204ENST00000540846 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 KCNG1Q9UIX4 513 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 EXOC7Q9UPT5 735 aa13.57□□□□□ -0.24
SMAD3-204ENST00000540846 EIF3CLB5ME19 914 aaKnown RBP13.56□□□□□ -0.24
SMAD3-204ENST00000540846 TISP43B9A030 160 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 H0YCG3 227 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 FANCGO15287 622 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 EXOC3O60645 756 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 PIGRP01833 764 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 EFNA5P52803 228 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 TFDP1Q14186 410 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 EXOC3L4Q17RC7 722 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 TCERG1LQ5VWI1 586 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 TRAF7Q6Q0C0 670 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 RRAGAQ7L523 313 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms