RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 NR1I2O75469 434 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 NPTXRO95502 500 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 EFEMP2O95967 443 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 ADH1AP07327 375 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 SPATA31C1P0DKV0 1188 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 XRCC6P12956 609 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNHG1-213ENST00000540725 ATP2B1P20020 1258 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 SLC27A1Q6PCB7 646 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 C15orf39Q6ZRI6 1047 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 CDR2LQ86X02 465 aaPredicted RBP15.67■□□□□ 0.1
SNHG1-213ENST00000540725 ACSF2Q96CM8 615 aaPredicted RBP15.67■□□□□ 0.1
SNHG1-213ENST00000540725 GPRC5CQ9NQ84 441 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 MAN1C1Q9NR34 630 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 FAM186AA6NE01 2351 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 LRRIQ4A6NIV6 560 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 AKAP5P24588 427 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 MCM7P33993 719 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 GUCY1B3Q02153 619 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNHG1-213ENST00000540725 KIAA0319Q5VV43 1072 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 MAEAQ7L5Y9 396 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 OTOP3Q7RTS5 596 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 GSTCDQ8NEC7 633 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 MCPH1Q8NEM0 835 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 CMASQ8NFW8 434 aaPredicted RBP15.66■□□□□ 0.1
SNHG1-213ENST00000540725 COLEC11Q9BWP8 271 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 RXFP1Q9HBX9 757 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 TUFT1Q9NNX1 390 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 ZMYM2Q9UBW7 1377 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 SPTBN4Q9H254 2564 aa15.66■□□□□ 0.1
SNHG1-213ENST00000540725 A0A1B0GUA9 196 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 EIF5BO60841 1220 aaKnown RBP15.65■□□□□ 0.1
SNHG1-213ENST00000540725 MED24O75448 989 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 GLUD1P00367 558 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 DSG1Q02413 1049 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 GRIK3Q13003 919 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 CATSPER3Q86XQ3 398 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 PRMT7Q9NVM4 692 aaPredicted RBP15.65■□□□□ 0.1
SNHG1-213ENST00000540725 KLK14Q9P0G3 267 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 PARP2Q9UGN5 583 aa15.65■□□□□ 0.1
SNHG1-213ENST00000540725 NUBP1P53384 320 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 CDCA2Q69YH5 1023 aaPredicted RBP15.64■□□□□ 0.09
SNHG1-213ENST00000540725 FUT10Q6P4F1 479 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 ELMSAN1Q6PJG2 1045 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 ZBTB8OSQ8IWT0 167 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 B3GALT6Q96L58 329 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 PRIMPOLQ96LW4 560 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 NACC1Q96RE7 527 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 POLR3CQ9BUI4 534 aaPredicted RBP15.64■□□□□ 0.09
SNHG1-213ENST00000540725 GPR62Q9BZJ7 368 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 CHST7Q9NS84 486 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 FAM86C1Q9NVL1 165 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 DPP7Q9UHL4 492 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 VWA8A3KMH1 1905 aa15.64■□□□□ 0.09
SNHG1-213ENST00000540725 CCDC195A0A1B0GUA6 201 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 SEC24BO95487 1268 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 OR52Z1P0C646 297 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 MYBP10242 640 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 FAM187BQ17R55 369 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 USP41Q3LFD5 358 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 POTEGQ6S5H5 508 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 CCDC83Q8IWF9 413 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 TMEM105Q8N8V8 129 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 ERMNQ8TAM6 284 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 C8orf76Q96K31 380 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 RHOBTB2Q9BYZ6 727 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 IRF2BPLQ9H1B7 796 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 MFSD1Q9H3U5 465 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 FZD8Q9H461 694 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 CFAP54Q96N23 3096 aa15.63■□□□□ 0.09
SNHG1-213ENST00000540725 TTLL13PA6NNM8 815 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 GALR2O43603 387 aaPredicted RBP15.62■□□□□ 0.09
SNHG1-213ENST00000540725 RFPL2O75678 378 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 SPATA31D3P0C874 917 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 RPA1P27694 616 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 ORC2Q13416 577 aaPredicted RBP15.62■□□□□ 0.09
SNHG1-213ENST00000540725 TDGQ13569 410 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 ZNF174Q15697 407 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 CYP26C1Q6V0L0 522 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 SPATA31D4Q6ZUB0 917 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 GPR65Q8IYL9 337 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 BSNDQ8WZ55 320 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 RABGGTAQ92696 567 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 ATOH1Q92858 354 aaPredicted RBP15.62■□□□□ 0.09
SNHG1-213ENST00000540725 C2orf40Q9H1Z8 148 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 KCNK12Q9HB15 430 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 WDR6Q9NNW5 1121 aaKnown RBP15.62■□□□□ 0.09
SNHG1-213ENST00000540725 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.62■□□□□ 0.09
SNHG1-213ENST00000540725 CACNG4Q9UBN1 327 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 LIMCH1Q9UPQ0 1083 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 WDR87Q6ZQQ6 2873 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 VPS13AQ96RL7 3174 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 ARHGEF35A5YM69 484 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 H0Y858 1186 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 N4BP3O15049 544 aa15.62■□□□□ 0.09
SNHG1-213ENST00000540725 N4BP1O75113 896 aaKnown RBP15.62■□□□□ 0.09
SNHG1-213ENST00000540725 C1RP00736 705 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms