RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 SEL1LQ9UBV2 794 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 SLC4A7Q9Y6M7 1214 aa11.62□□□□□ -0.55
ATL3-204ENST00000540699 PHLPP2Q6ZVD8 1323 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 BDP1A6H8Y1 2624 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 SFI1A8K8P3 1242 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 C9IYK1 514 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 TSPAN1O60635 241 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 TBCAO75347 108 aaKnown RBP11.61□□□□□ -0.55
ATL3-204ENST00000540699 FGFR4P22455 802 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 AXLP30530 894 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 HOXA11P31270 313 aaPredicted RBP11.61□□□□□ -0.55
ATL3-204ENST00000540699 KCNJ6P48051 423 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 NCKAP1LP55160 1127 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 DEFB103AP81534 67 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 FANCCQ00597 558 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 DMP1Q13316 513 aaPredicted RBP11.61□□□□□ -0.55
ATL3-204ENST00000540699 RAB30Q15771 203 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 BMT2Q1RMZ1 405 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 CATSPER4Q7RTX7 472 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.61□□□□□ -0.55
ATL3-204ENST00000540699 ZBTB8OSQ8IWT0 167 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 MYOCDQ8IZQ8 938 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 DEPTORQ8TB45 409 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 SCFD1Q8WVM8 642 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 TRIM5Q9C035 493 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 PARVGQ9HBI0 331 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 C1orf112Q9NSG2 853 aa11.61□□□□□ -0.55
ATL3-204ENST00000540699 PRMT7Q9NVM4 692 aaPredicted RBP11.61□□□□□ -0.55
ATL3-204ENST00000540699 LARSQ9P2J5 1176 aaKnown RBP11.61□□□□□ -0.55
ATL3-204ENST00000540699 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 TRIP11Q15643 1979 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 RALGAPA2Q2PPJ7 1873 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 NLRC5Q86WI3 1866 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 BICDL2A1A5D9 508 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 ZBBXA8MT70 800 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 INO80B-WBP1J3KQ70 363 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 ACKR2O00590 384 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 FAM13AO94988 1023 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 AMHP03971 560 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 MAPTP10636 758 aaKnown RBP11.6□□□□□ -0.55
ATL3-204ENST00000540699 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
ATL3-204ENST00000540699 CASP5P51878 434 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 ANKRD40Q6AI12 368 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 SLC24A5Q71RS6 500 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 IRF2BP1Q8IU81 584 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 HERC6Q8IVU3 1022 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 ZC3H3Q8IXZ2 948 aaKnown RBP11.6□□□□□ -0.55
ATL3-204ENST00000540699 TMEM161BQ8NDZ6 487 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 TOP1MTQ969P6 601 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 CCDC51Q96ER9 411 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 GAS2L1Q99501 681 aaPredicted RBP11.6□□□□□ -0.55
ATL3-204ENST00000540699 ADAM2Q99965 735 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 KIFC3Q9BVG8 833 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 STRA6Q9BX79 667 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 KCTD10Q9H3F6 313 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 ST6GALNAC4Q9H4F1 302 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 PRDM12Q9H4Q4 367 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 KMT5AQ9NQR1 393 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 MSRAQ9UJ68 235 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 KIAA1671Q9BY89 1806 aa11.6□□□□□ -0.55
ATL3-204ENST00000540699 CITO14578 2027 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 A0A0U1RQF3 1178 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 A0A1B0GUA9 196 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 LRRC10BA6NIK2 292 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 H0YCG3 227 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 EIF3DO15371 548 aaKnown RBP eCLIP11.59□□□□□ -0.55
ATL3-204ENST00000540699 ZNF623O75123 536 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 PPP1R37O75864 691 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 ERLIN2O94905 339 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 GJB5O95377 273 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 EDN1P05305 212 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 PRKCBP05771 671 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 MYBP10242 640 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 ZSCAN20P17040 1043 aaPredicted RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 HOXD13P35453 343 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 SMTNP53814 917 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 HTRA4P83105 476 aaPredicted RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 LRRC63Q05C16 580 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 MAPK6Q16659 721 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 UBXN11Q5T124 520 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 NPAS4Q8IUM7 802 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 ZNF507Q8TCN5 953 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 NOC3LQ8WTT2 800 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 ATXN2LQ8WWM7 1075 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 NKX2-4Q9H2Z4 354 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 ZHX3Q9H4I2 956 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 THAP9Q9H5L6 903 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 ELAC1Q9H777 363 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 RC3H2Q9HBD1 1191 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 INTS13Q9NVM9 706 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 IFNKQ9P0W0 207 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms