RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 LPAL2Q16609 132 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 JAKMIP3Q5VZ66 844 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 PCNX4Q63HM2 1172 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 CPLX2Q6PUV4 134 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 MTHFD1LQ6UB35 978 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 PRR23BQ6ZRT6 265 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 TRIM22Q8IYM9 498 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 TMEM40Q8WWA1 233 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 CRYGNQ8WXF5 182 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 IGSF21Q96ID5 467 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 ZFRQ96KR1 1074 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 UPF2Q9HAU5 1272 aaKnown RBP9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 C6orf50Q9HD87 102 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 SH3GLB2Q9NR46 395 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 ANKFY1Q9P2R3 1169 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 NUMBLQ9Y6R0 609 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 LOXHD1Q8IVV2 1947 aa9.97□□□□□ -0.81
TRAPPC1-202ENST00000540486 SPDYE3A6NKU9 549 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 M0R2N6 131 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 ATP9AO75110 1047 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 PAPLNO95428 1278 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 FOSP01100 380 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 GNA11P29992 359 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 CNR2P34972 360 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 CRYBB1P53674 252 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 NLRP5P59047 1200 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 SIM2Q14190 667 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 AASDHQ4L235 1098 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 CLLU1OSQ5K130 101 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 ECHDC2Q86YB7 292 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 TEX2Q8IWB9 1127 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 CCDC83Q8IWF9 413 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 ZSCAN31Q96LW9 406 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 IER2Q9BTL4 223 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 LSM14BQ9BX40 385 aaKnown RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 ANO3Q9BYT9 981 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 AZI2Q9H6S1 392 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 RXFP3Q9NSD7 469 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 ORC3Q9UBD5 711 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 KCNJ14Q9UNX9 436 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 MRPS17Q9Y2R5 130 aaKnown RBP9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 UBIAD1Q9Y5Z9 338 aa9.96□□□□□ -0.82
TRAPPC1-202ENST00000540486 INPPL1O15357 1258 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 LILRB3O75022 631 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 CDKL5O76039 1030 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 CNPP09543 421 aaKnown RBP9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 TDGF1P13385 188 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 KCNA2P16389 499 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 MTAPQ13126 283 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 AP3B2Q13367 1082 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 PLCB4Q15147 1175 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 PLPPR4Q7Z2D5 763 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 FAM228AQ86W67 206 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 KIAA0319LQ8IZA0 1049 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 CCDC12Q8WUD4 166 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 HDAC7Q8WUI4 952 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 SMG7Q92540 1137 aaKnown RBP9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 GPRASP2Q96D09 838 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 PHF20Q9BVI0 1012 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 GLT8D2Q9H1C3 349 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 JADE2Q9NQC1 790 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 MAN1C1Q9NR34 630 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 PCDHA4Q9UN74 947 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 STK36Q9NRP7 1315 aa9.95□□□□□ -0.82
TRAPPC1-202ENST00000540486 MIA3Q5JRA6 1907 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 A0A0U1RQF3 1178 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 MEIS1O00470 390 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 MAFGO15525 162 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 ZC3H11AO75152 810 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 C1RP00736 705 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 CYP3A4P08684 503 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 KLRC1P26715 233 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 SREBF1P36956 1147 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 SLC26A2P50443 739 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 ADCY1Q08828 1119 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 SOWAHCQ53LP3 525 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 ZNF852Q6ZMS4 543 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 MTSS1LQ765P7 747 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 TMEM173Q86WV6 379 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 BLIDQ8IZY5 108 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 C12orf50Q8NA57 414 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 CCDC148Q8NFR7 591 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 TRAPPC12Q8WVT3 735 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 GATA6Q92908 595 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 PCYT2Q99447 389 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 MXRA8Q9BRK3 442 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 RPP25Q9BUL9 199 aaKnown RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 PIDD1Q9HB75 910 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 MRPL17Q9NRX2 175 aaKnown RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 IGSF5Q9NSI5 407 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 WASF3Q9UPY6 502 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 SSX2IPQ9Y2D8 614 aa9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 DSPP15924 2871 aaKnown RBP9.94□□□□□ -0.82
TRAPPC1-202ENST00000540486 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-202ENST00000540486 FAM86B1E9PN63 330 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms