RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 G6PC3Q9BUM1 346 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 ASPNQ9BXN1 380 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 FTOQ9C0B1 505 aaKnown RBP eCLIP4.73□□□□□ -1.65
C2CD3-214ENST00000540057 FBXO28Q9NVF7 368 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 LRP2BPQ9P2M1 347 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 KLHL3Q9UH77 587 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 KCNH3Q9ULD8 1083 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 PA2G4Q9UQ80 394 aaKnown RBP4.73□□□□□ -1.65
C2CD3-214ENST00000540057 CACNA1HO95180 2353 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 VPS13AQ96RL7 3174 aa4.73□□□□□ -1.65
C2CD3-214ENST00000540057 TNKSO95271 1327 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 ZFHX4Q86UP3 3567 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 NPIPB6E9PJ23 425 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 STXBP3O00186 592 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 ETV2O00321 342 aaPredicted RBP4.72□□□□□ -1.65
C2CD3-214ENST00000540057 VWA5AO00534 786 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 NFIBO00712 420 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 GJB5O95377 273 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 EFEMP2O95967 443 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 GLDCP23378 1020 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 COPB2P35606 906 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 KCNJ6P48051 423 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 PLCD1P51178 756 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 TNFAIP2Q03169 654 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 GABPAQ06546 454 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 DLX2Q07687 328 aaPredicted RBP4.72□□□□□ -1.65
C2CD3-214ENST00000540057 SIGLEC14Q08ET2 396 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 GPNMBQ14956 572 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 NR0B2Q15466 257 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 CLUL1Q15846 466 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 FSCN1Q16658 493 aaKnown RBP4.72□□□□□ -1.65
C2CD3-214ENST00000540057 PTPROQ16827 1216 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 TCTN1Q2MV58 587 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 ARMCX2Q7L311 632 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 DGLUCYQ7Z3D6 616 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 RPAINQ86UA6 219 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 SIAH1Q8IUQ4 282 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 CCDC144CPQ8IYA2 1237 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 MAGEB6Q8N7X4 407 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 GOLM1Q8NBJ4 401 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.72□□□□□ -1.65
C2CD3-214ENST00000540057 CCDC74BQ96LY2 380 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 KIF2CQ99661 725 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 LRRC3Q9BY71 257 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 VCPKMTQ9H867 229 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 COPRSQ9NQ92 184 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 KBTBD4Q9NVX7 518 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 CLDND1Q9NY35 253 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 VTI1BQ9UEU0 232 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 CTNNA3Q9UI47 895 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 TMX2Q9Y320 296 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 RIPK3Q9Y572 518 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 RIF1Q5UIP0 2472 aaKnown RBP4.72□□□□□ -1.65
C2CD3-214ENST00000540057 DMXL1Q9Y485 3027 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 BAHCC1Q9P281 2608 aa4.72□□□□□ -1.65
C2CD3-214ENST00000540057 CFAP47Q6ZTR5 3102 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 NLRC5Q86WI3 1866 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 NAV1Q8NEY1 1877 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 MYO7AQ13402 2215 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 NOTOA8MTQ0 251 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 LOC730098B7Z3J9 87 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 MPHOSPH10O00566 681 aaKnown RBP4.71□□□□□ -1.66
C2CD3-214ENST00000540057 WDR46O15213 610 aaKnown RBP4.71□□□□□ -1.66
C2CD3-214ENST00000540057 ZEB2O60315 1214 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 UBOX5O94941 541 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 ZSCAN22P10073 491 aaPredicted RBP4.71□□□□□ -1.66
C2CD3-214ENST00000540057 TFCP2Q12800 502 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 PWP1Q13610 501 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 COL9A2Q14055 689 aaPredicted RBP4.71□□□□□ -1.66
C2CD3-214ENST00000540057 SNAP47Q5SQN1 464 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 TMEM63BQ5T3F8 832 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 ATG14Q6ZNE5 492 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 NOL8Q76FK4 1167 aaKnown RBP4.71□□□□□ -1.66
C2CD3-214ENST00000540057 FRMD5Q7Z6J6 570 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 RELL1Q8IUW5 271 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 LILRA2Q8N149 483 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 NKD2Q969F2 451 aaPredicted RBP4.71□□□□□ -1.66
C2CD3-214ENST00000540057 NEUROD6Q96NK8 337 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 HDAC8Q9BY41 377 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 AP5M1Q9H0R1 490 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 SCN10AQ9Y5Y9 1956 aa4.71□□□□□ -1.66
C2CD3-214ENST00000540057 MYOCOSA0A1B0GUC4 107 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 FITM1A5D6W6 292 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 MINDY4BA8MYZ0 360 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 H3BNC9 293 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 RGS13O14921 159 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 TBX10O75333 385 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 PDGFBP01127 241 aaPredicted RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 PURAQ00577 322 aaKnown RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 CNTN2Q02246 1040 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 HYAL1Q12794 435 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 SMAD4Q13485 552 aaKnown RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 GPM6BQ13491 265 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 CBX2Q14781 532 aaPredicted RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 LRRFIP1Q32MZ4 808 aaKnown RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 EPC2Q52LR7 807 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 GORABQ5T7V8 394 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 SNRNP48Q6IEG0 339 aaKnown RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 CNKSR3Q6P9H4 555 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 FBXL19Q6PCT2 694 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms