RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 AK2P54819 239 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 SETQ01105 290 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 PFKPQ01813 784 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 PTH1RQ03431 593 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 CSTF1Q05048 431 aaKnown RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 SLC44A4Q53GD3 710 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 PPP1R18Q6NYC8 613 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 TMTC3Q6ZXV5 915 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 MRPL10Q7Z7H8 261 aaKnown RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF410Q86VK4 478 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 TMEM173Q86WV6 379 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 EXOC8Q8IYI6 725 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 MAML2Q8IZL2 1156 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 LRRC71Q8N4P6 559 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 ZBTB44Q8NCP5 570 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 CNNM3Q8NE01 707 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 PJA1Q8NG27 643 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 SMG7Q92540 1137 aaKnown RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 PHKBQ93100 1093 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 RPS6KC1Q96S38 1066 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 MYADMQ96S97 322 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 MYL10Q9BUA6 226 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 PRKD2Q9BZL6 878 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 GBP3Q9H0R5 595 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 MAN1C1Q9NR34 630 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 FAM105AQ9NUU6 356 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 RBM28Q9NW13 759 aaKnown RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 SPATA6Q9NWH7 488 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 ZDHHC7Q9NXF8 308 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 SEPT9Q9UHD8 586 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 ATP6V1DQ9Y5K8 247 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 V9GY48 417 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-219ENST00000539952 DCHS1Q96JQ0 3298 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 CLUHO75153 1309 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 OTOGLQ3ZCN5 2332 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 CHD6Q8TD26 2715 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 IGLV3-22A0A075B6J6 115 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 A0A087WZ62 844 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 IGKV6-21A0A0C4DH24 114 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 hCG_1642624A0A1W2PR95 340 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 DCDC2BA2VCK2 349 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 RCCD1A6NED2 376 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 FAM170BA6NMN3 283 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 WDR64B1ANS9 1081 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 SH2B2O14492 632 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 TEX28O15482 410 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 FOXD2O60548 495 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 LILRB5O75023 590 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 PRPF40AO75400 957 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CSDE1O75534 798 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 DDHD2O94830 711 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 OATP04181 439 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 SSBP05455 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 URODP06132 367 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 GLULP15104 373 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 FGFR4P22455 802 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 SFNP31947 248 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CIITAP33076 1130 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CLK2P49760 499 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 NRLP54845 237 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 GPC5P78333 572 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 SNW1Q13573 536 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CUL4AQ13619 759 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 ZBTB41Q5SVQ8 909 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 WWC2Q6AWC2 1192 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CAVIN1Q6NZI2 390 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 SASS6Q6UVJ0 657 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 MTSS1LQ765P7 747 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CATSPER4Q7RTX7 472 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 SGMS1Q86VZ5 419 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF280BQ86YH2 543 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 NELL1Q92832 810 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 LPPQ93052 612 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 TATDN2Q93075 761 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 PGBD1Q96JS3 809 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF668Q96K58 619 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 PRIMPOLQ96LW4 560 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 RIT2Q99578 217 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 JPH2Q9BR39 696 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 FDXACB1Q9BRP7 624 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 DDX23Q9BUQ8 820 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 COLEC11Q9BWP8 271 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 VN1R3Q9BXE9 311 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 NIFKQ9BYG3 293 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 DISC1Q9NRI5 854 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 BARHL2Q9NY43 387 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 KIAA1468Q9P260 1216 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 FNIP2Q9P278 1114 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 DNAJB4Q9UDY4 337 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 GMEB2Q9UKD1 530 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 INPP5FQ9Y2H2 1132 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 MRPS17Q9Y2R5 130 aaKnown RBP6.66□□□□□ -1.34
CPSF7-219ENST00000539952 PCDHB2Q9Y5E7 798 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 MAST4O15021 2626 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CNTNAP2Q9UHC6 1331 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 CEP250Q9BV73 2442 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 NCOR2Q9Y618 2525 aa6.66□□□□□ -1.34
CPSF7-219ENST00000539952 ACACBO00763 2458 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 POTEMA6NI47 508 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms