RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 METTL23Q86XA0 190 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 PDCL2Q8N4E4 241 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 HDDC3Q8N4P3 179 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 MTRQ99707 1265 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 NACA2Q9H009 215 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 SMG5Q9UPR3 1016 aaKnown RBP8.36□□□□□ -1.07
GNE-205ENST00000539815 C2orf71A6NGG8 1288 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 CCR3P51677 355 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 HDAC1Q13547 482 aaPredicted RBP8.36□□□□□ -1.07
GNE-205ENST00000539815 C15orf39Q6ZRI6 1047 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 TMTC3Q6ZXV5 915 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 CYB5R4Q7L1T6 521 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 GRASPQ7Z6J2 395 aaPredicted RBP8.36□□□□□ -1.07
GNE-205ENST00000539815 DDX53Q86TM3 631 aaKnown RBP8.36□□□□□ -1.07
GNE-205ENST00000539815 DCLK2Q8N568 766 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 ING5Q8WYH8 240 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 SH2D3AQ9BRG2 576 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 ZSWIM4Q9H7M6 989 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 ANGPTL2Q9UKU9 493 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 CYP46A1Q9Y6A2 500 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 EPG5Q9HCE0 2579 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 ACACAQ13085 2346 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 ATG13O75143 517 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 THP07101 528 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 GALTP07902 379 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 KCNA2P16389 499 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 ITGB5P18084 799 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 MCM4P33991 863 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 PRKCQQ04759 706 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 SPEM2Q0P670 501 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 INF2Q27J81 1249 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 CCDC60Q8IWA6 550 aaPredicted RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 ST13P5Q8NFI4 369 aaPredicted RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 RDM1Q8NG50 284 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 GPR152Q8TDT2 470 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 HASPINQ8TF76 798 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 RTKNQ9BST9 563 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 MTA3Q9BTC8 594 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 TTC12Q9H892 705 aaPredicted RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 CLEC1BQ9P126 229 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 DDX25Q9UHL0 483 aaKnown RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 GDAQ9Y2T3 454 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 CLUHO75153 1309 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 RP1L1Q8IWN7 2480 aaPredicted RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 USO1O60763 962 aaKnown RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 CYP21A2P08686 494 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 LIFRP42702 1097 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 SCNN1GP51170 649 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 ADCY1Q08828 1119 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 MLF2Q15773 248 aaPredicted RBP8.35□□□□□ -1.07
GNE-205ENST00000539815 SLC44A4Q53GD3 710 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 PPM1JQ5JR12 505 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 MFSD4BQ5TF39 518 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 SYCE2Q6PIF2 218 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 CCDC105Q8IYK2 499 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 PHOX2BQ99453 314 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 RIT2Q99578 217 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 TTPALQ9BTX7 342 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 ZSCAN32Q9NX65 697 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 MYO10Q9HD67 2058 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 PTPRFP10586 1907 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 KANSL1LA0AUZ9 987 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 ABL1P00519 1130 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 GDI1P31150 447 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 RFC5P40937 340 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 TCF15Q12870 199 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 TMEM105Q8N8V8 129 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 APPL2Q8NEU8 664 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 TMEM143Q96AN5 459 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 MAP3K14Q99558 947 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 FOXQ1Q9C009 403 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 C2orf40Q9H1Z8 148 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 CDH7Q9ULB5 785 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 DUSP12Q9UNI6 340 aa8.35□□□□□ -1.07
GNE-205ENST00000539815 P4HBP07237 508 aaKnown RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 CNPP09543 421 aaKnown RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 AXLP30530 894 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 SMTNP53814 917 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 EPHB3P54753 998 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 FUT10Q6P4F1 479 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 MYRIPQ8NFW9 859 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 SLC7A14Q8TBB6 771 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 RASGRP4Q8TDF6 673 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 MSLNLQ96KJ4 702 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 TMEM175Q9BSA9 504 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 ASAH2Q9NR71 780 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 LOC285556D6RIA3 1793 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 SPTA1P02549 2419 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 PIK3CDO00329 1044 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 SOD2P04179 222 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 PTPN2P17706 415 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 OR1D2P34982 312 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 SLC11A1P49279 550 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 GABPB1Q06547 395 aaPredicted RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 LMBRD2Q68DH5 695 aaPredicted RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 RNF43Q68DV7 783 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms