RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 COLGALT2Q8IYK4 626 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 SLC44A3Q8N4M1 653 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 FBXO18Q8NFZ0 1043 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 SMG7Q92540 1137 aaKnown RBP16.63■□□□□ 0.25
USB1-203ENST00000539737 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 RPS6KC1Q96S38 1066 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 RGL1Q9NZL6 768 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 IPPQ9Y573 584 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 CYP3A7-CYP3A51PA0A087WV96 503 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 ALDH2P05091 517 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 RFX1P22670 979 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 CYP3A7P24462 503 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 RAB27AP51159 221 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 PSMC5P62195 406 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 NR5A1Q13285 461 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 KIAA0319Q5VV43 1072 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 CEP170P1Q96L14 293 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 GPR62Q9BZJ7 368 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
USB1-203ENST00000539737 WDR6Q9NNW5 1121 aaKnown RBP16.62■□□□□ 0.25
USB1-203ENST00000539737 KLK14Q9P0G3 267 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 DDX25Q9UHL0 483 aaKnown RBP16.62■□□□□ 0.25
USB1-203ENST00000539737 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
USB1-203ENST00000539737 TDRD15B5MCY1 1934 aaKnown RBP16.62■□□□□ 0.25
USB1-203ENST00000539737 ARL5CA6NH57 179 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 B4GALT5O43286 388 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 TSPAN1O60635 241 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 DKC1O60832 514 aaKnown RBP eCLIP16.61■□□□□ 0.251e-5■■■■□ 25.7
USB1-203ENST00000539737 GLUD1P00367 558 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 SKIP12755 728 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 ITGA4P13612 1032 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 AKAP5P24588 427 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 GJB2P29033 226 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 GLUD2P49448 558 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 CYP4A11Q02928 519 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 CUL4AQ13619 759 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 GNL2Q13823 731 aaKnown RBP16.61■□□□□ 0.25
USB1-203ENST00000539737 CTTNQ14247 550 aaKnown RBP16.61■□□□□ 0.25
USB1-203ENST00000539737 PPP4R3AQ6IN85 833 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
USB1-203ENST00000539737 RNF149Q8NC42 400 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 PAAF1Q9BRP4 392 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 TMEM175Q9BSA9 504 aa16.61■□□□□ 0.25
USB1-203ENST00000539737 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
USB1-203ENST00000539737 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
USB1-203ENST00000539737 TGM5O43548 720 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 EFEMP2O95967 443 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
USB1-203ENST00000539737 IGFBP6P24592 240 aaPredicted RBP16.6■□□□□ 0.25
USB1-203ENST00000539737 CDC42EP1Q00587 391 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 EMC2Q15006 297 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 EARS2Q5JPH6 523 aaKnown RBP16.6■□□□□ 0.25
USB1-203ENST00000539737 C15orf39Q6ZRI6 1047 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 RNF168Q8IYW5 571 aaPredicted RBP16.6■□□□□ 0.25
USB1-203ENST00000539737 ASAP3Q8TDY4 903 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 SNX21Q969T3 373 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 DYDC2Q96IM9 177 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 RTP3Q9BQQ7 232 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 INO80BQ9C086 356 aaPredicted RBP16.6■□□□□ 0.25
USB1-203ENST00000539737 DHX33Q9H6R0 707 aaKnown RBP16.6■□□□□ 0.25
USB1-203ENST00000539737 XPNPEP1Q9NQW7 623 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 IGSF9Q9P2J2 1179 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 NUMBLQ9Y6R0 609 aa16.6■□□□□ 0.25
USB1-203ENST00000539737 CCNT1O60563 726 aaKnown RBP16.59■□□□□ 0.25
USB1-203ENST00000539737 ADH1AP07327 375 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 QARSP47897 775 aaKnown RBP16.59■□□□□ 0.25
USB1-203ENST00000539737 FOXK2Q01167 660 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 CMASQ8NFW8 434 aaPredicted RBP16.59■□□□□ 0.25
USB1-203ENST00000539737 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
USB1-203ENST00000539737 HAS1Q92839 578 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 JPH2Q9BR39 696 aaPredicted RBP16.59■□□□□ 0.25
USB1-203ENST00000539737 LXNQ9BS40 222 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 NT5C3AQ9H0P0 336 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 PIDD1Q9HB75 910 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 ARHGEF3Q9NR81 526 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 DLGAP2Q9P1A6 1054 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 EPS15L1Q9UBC2 864 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 USP20Q9Y2K6 914 aa16.59■□□□□ 0.25
USB1-203ENST00000539737 MTF2Q9Y483 593 aaPredicted RBP16.59■□□□□ 0.25
USB1-203ENST00000539737 MTCL1Q9Y4B5 1905 aaKnown RBP16.58■□□□□ 0.25
USB1-203ENST00000539737 ADAM12O43184 909 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 GAS2O43903 313 aaKnown RBP16.58■□□□□ 0.24
USB1-203ENST00000539737 BAG4O95429 457 aaKnown RBP16.58■□□□□ 0.24
USB1-203ENST00000539737 LMNAP02545 664 aaKnown RBP16.58■□□□□ 0.24
USB1-203ENST00000539737 SP9P0CG40 484 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 SRFP11831 508 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 DSC1Q08554 894 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 HTR4Q13639 388 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 XKR9Q5GH70 373 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms