RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 PRC1O43663 620 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 CASRP41180 1078 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 RIN1Q13671 783 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 ACAP1Q15027 740 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 ATP2B3Q16720 1220 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 SLFN13Q68D06 897 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 GADL1Q6ZQY3 521 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 TTC7BQ86TV6 843 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 HPS3Q969F9 1004 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 PRDM11Q9NQV5 511 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 IPPQ9Y573 584 aa8.49□□□□□ -1.05
TRAV11-201ENST00000539512 UBE2QL1A1L167 161 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 PMS2P1A4D2B8 440 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 NPEPPSL1A6NEC2 478 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 PRPF3O43395 683 aaKnown RBP8.48□□□□□ -1.05
TRAV11-201ENST00000539512 CTNND1O60716 968 aaKnown RBP8.48□□□□□ -1.05
TRAV11-201ENST00000539512 IL2RBP14784 551 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 RPS19P39019 145 aaKnown RBP8.48□□□□□ -1.05
TRAV11-201ENST00000539512 EPHB4P54760 987 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 IL10RAQ13651 578 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 ZNF267Q14586 743 aaPredicted RBP8.48□□□□□ -1.05
TRAV11-201ENST00000539512 KRTAP19-4Q3LI73 84 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 UBXN11Q5T124 520 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 KAT5Q92993 513 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 PDCD2LQ9BRP1 358 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 NELFAQ9H3P2 528 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 MAN1C1Q9NR34 630 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 MOCS1Q9NZB8 636 aa8.48□□□□□ -1.05
TRAV11-201ENST00000539512 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.48□□□□□ -1.05
TRAV11-201ENST00000539512 SGTAO43765 313 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 CDC42EP1Q00587 391 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 SEPT2Q15019 361 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 ATAT1Q5SQI0 421 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 Q6ZVL8 140 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 FRMD5Q7Z6J6 570 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 OR2I1PQ8NGU4 316 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 MDM1Q8TC05 714 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 C1GALT1C1Q96EU7 318 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 IL17RAQ96F46 866 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 TMX3Q96JJ7 454 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 GPHA2Q96T91 129 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 LDAHQ9H6V9 325 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 ANLNQ9NQW6 1124 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 C1orf112Q9NSG2 853 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 TRPS1Q9UHF7 1281 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 HDAC5Q9UQL6 1122 aa8.47□□□□□ -1.05
TRAV11-201ENST00000539512 TEX33O43247 280 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 GPR32O75388 356 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 EDNRBP24530 442 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 SREBF1P36956 1147 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 GZMKP49863 264 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 APBA1Q02410 837 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 TAX1BP1Q86VP1 789 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 SLC35G2Q8TBE7 412 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 DIS3LQ8TF46 1054 aaKnown RBP8.46□□□□□ -1.06
TRAV11-201ENST00000539512 CFHR4Q92496 578 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 RGMAQ96B86 450 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 CLPTM1LQ96KA5 538 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 KCNC2Q96PR1 638 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 OR14A2Q96R54 314 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 SLC12A5Q9H2X9 1139 aa8.46□□□□□ -1.06
TRAV11-201ENST00000539512 FTLP02792 175 aaPredicted RBP8.45□□□□□ -1.06
TRAV11-201ENST00000539512 SYN1P17600 705 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 PTH1RQ03431 593 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 GLB1LQ6UWU2 654 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 DENND1CQ8IV53 801 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 CCAR1Q8IX12 1150 aaKnown RBP8.45□□□□□ -1.06
TRAV11-201ENST00000539512 TRMT2AQ8IZ69 625 aaKnown RBP8.45□□□□□ -1.06
TRAV11-201ENST00000539512 HOXB13Q92826 284 aaPredicted RBP8.45□□□□□ -1.06
TRAV11-201ENST00000539512 TAAR9Q96RI9 348 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 FAM204AQ9H8W3 233 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 PARD6AQ9NPB6 346 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 AJAP1Q9UKB5 411 aaPredicted RBP8.45□□□□□ -1.06
TRAV11-201ENST00000539512 POLHQ9Y253 713 aa8.45□□□□□ -1.06
TRAV11-201ENST00000539512 MYBBP1AQ9BQG0 1328 aaKnown RBP8.45□□□□□ -1.06
TRAV11-201ENST00000539512 SLC16A6O15403 523 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 ADCY6O43306 1168 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 RAP2AP10114 183 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 SMARCA1P28370 1054 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 CREMQ03060 361 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 HLTFQ14527 1009 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRAV11-201ENST00000539512 RAB39AQ14964 217 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 PRAMEF14Q5SWL7 426 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 LCNL1Q6ZST4 164 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 PRR18Q8N4B5 295 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 REPS2Q8NFH8 660 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 FBXO18Q8NFZ0 1043 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 RAB24Q969Q5 203 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 TMEM176AQ96HP8 235 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 FAM193BQ96PV7 902 aaPredicted RBP8.44□□□□□ -1.06
TRAV11-201ENST00000539512 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 OBP2AQ9NY56 170 aa8.44□□□□□ -1.06
TRAV11-201ENST00000539512 OTOL1A6NHN0 477 aaPredicted RBP8.43□□□□□ -1.06
TRAV11-201ENST00000539512 CAND2O75155 1236 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 ARIH2O95376 493 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 PLATP00750 562 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
TRAV11-201ENST00000539512 GNAT2P19087 354 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 DDCP20711 480 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms