RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 KCNA1Q09470 495 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 FUT2Q10981 343 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 TTC23LQ6PF05 361 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 KLHL35Q6PF15 583 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 DIS3L2Q8IYB7 885 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SLC16A10Q8TF71 515 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 INPP5DQ92835 1189 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 KLHL29Q96CT2 875 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CCDC43Q96MW1 224 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 PPP1R10Q96QC0 940 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 DCLRE1BQ9H816 532 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CD209Q9NNX6 404 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 TCF7L2Q9NQB0 619 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 MCM9Q9NXL9 1143 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 STOML1Q9UBI4 398 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 STK39Q9UEW8 545 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SATB2Q9UPW6 733 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 TMEM114B3SHH9 223 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 PIK3CDO00329 1044 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SPTLC1O15269 473 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ATP9AO75110 1047 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ATP1A1P05023 1023 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 USP17L8P0C7I0 530 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 MYBP10242 640 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 IL1R1P14778 569 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 PFKFB1P16118 471 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CMA1P23946 247 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SERPINB6P35237 376 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 B2MP61769 119 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 TBL3Q12788 808 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CRY1Q16526 586 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 MYLK3Q32MK0 819 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 FAM47AQ5JRC9 791 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 WDR45BQ5MNZ6 344 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 TWF2Q6IBS0 349 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 BORAQ6PGQ7 559 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 IFT20Q8IY31 132 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CYP4X1Q8N118 509 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SH3RF3Q8TEJ3 882 aaPredicted RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 FBXO41Q8TF61 875 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ATXN2LQ8WWM7 1075 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SHISA4Q96DD7 197 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 DGCR14Q96DF8 476 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 C8orf48Q96LL4 319 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 FOXP1Q9H334 677 aaPredicted RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 IFT122Q9HBG6 1241 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CNOT8Q9UFF9 292 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SEC63Q9UGP8 760 aaKnown RBP6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 GGA1Q9UJY5 639 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 DLEC1Q9Y238 1755 aa6.16□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ZNF862O60290 1169 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ZMYND10O75800 440 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 DDAH1O94760 285 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 PLEKHA8P1O95397 391 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CALM1P0DP23 149 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CALM2P0DP24 149 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 CALM3P0DP25 149 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ERCC5P28715 1186 aaPredicted RBP6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 GSTO1P78417 241 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ZNF827Q17R98 1081 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ZCWPW2Q504Y3 356 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 C12orf60Q5U649 245 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 RESP18Q5W5W9 173 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 SHC4Q6S5L8 630 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 B3GNT6Q6ZMB0 384 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 OSTM1Q86WC4 334 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 LINC00469Q8N7U9 141 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 TBC1D16Q8TBP0 767 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 FERMT2Q96AC1 680 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 LRRC1Q9BTT6 524 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 ASCC2Q9H1I8 757 aaPredicted RBP6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 RXFP1Q9HBX9 757 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 POLLQ9UGP5 575 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 REXO2Q9Y3B8 237 aaKnown RBP6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 PCDHGB3Q9Y5G1 929 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 MYH2Q9UKX2 1941 aa6.15□□□□□ -1.42
RAB3GAP1-207ENST00000539493 TSPY2A6NKD2 308 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PHF20L1A8MW92 1017 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 RASA4BC9J798 803 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ARHGAP33O14559 1287 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 RASA4O43374 803 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SNX3O60493 162 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PDE5AO76074 875 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SLC16A2P36021 539 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TOB1P50616 345 aaPredicted RBP6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 HSD17B4P51659 736 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 MAP3K10Q02779 954 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 COX10Q12887 443 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NR5A1Q13285 461 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 AGMOQ6ZNB7 445 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PATL1Q86TB9 770 aaKnown RBP6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 VPS36Q86VN1 386 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NELFCDQ8IXH7 590 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 CPSF7Q8N684 471 aaKnown RBP6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 OR7G1Q8NGA0 311 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 OXER1Q8TDS5 423 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 USP6NLQ92738 828 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 CRAMP1Q96RY5 1269 aa6.15□□□□□ -1.43
RAB3GAP1-207ENST00000539493 CTRCQ99895 268 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms