RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 FAM43AQ8N2R8 423 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TP53I13Q8NBR0 393 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TXNDC5Q8NBS9 432 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 PLA2G15Q8NCC3 412 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 MDM1Q8TC05 714 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 ZNF480Q8WV37 535 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TTC17Q96AE7 1141 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 MBD6Q96DN6 1003 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 AJUBAQ96IF1 538 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TMX3Q96JJ7 454 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 RPL10LQ96L21 214 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 MRGPRX4Q96LA9 322 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 SAMD11Q96NU1 681 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 FAM204AQ9H8W3 233 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 ZMAT3Q9HA38 289 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TDP1Q9NUW8 608 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 NTMQ9P121 344 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TAGLN3Q9UI15 199 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 AJAP1Q9UKB5 411 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 CNOT6Q9ULM6 557 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 L1RE1Q9UN81 338 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 SMG5Q9UPR3 1016 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 RUVBL1Q9Y265 456 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 ZDHHC9Q9Y397 364 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 DAAM1Q9Y4D1 1078 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 CFAP20Q9Y6A4 193 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 ANO9A1A5B4 782 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 SH3D21A4FU49 640 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 DAPK3O43293 454 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 PQBP1O60828 265 aaKnown RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 IFIT2P09913 472 aaKnown RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 MED14OSP0DP75 135 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 PEX2P28328 305 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 CASRP41180 1078 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 KIR2DL3P43628 341 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 SARSP49591 514 aaKnown RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 HK3P52790 923 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 PER3P56645 1201 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 BPIFB4P59827 614 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 RAB1AP62820 205 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ATP8B2P98198 1209 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 CDC42EP1Q00587 391 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 TLE1Q04724 770 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 SNAPC2Q13487 334 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 HDAC1Q13547 482 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 SAFB2Q14151 953 aaKnown RBP eCLIP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 BRD3Q15059 726 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 MAN2A1Q16706 1144 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ZNF827Q17R98 1081 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 LONRF1Q17RB8 773 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 RNF151Q2KHN1 245 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ANO6Q4KMQ2 910 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 CCDC157Q569K6 752 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 PRAMEF14Q5SWL7 426 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ZNF648Q5T619 568 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 C10orf62Q5T681 223 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 RNF220Q5VTB9 566 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 APOA5Q6Q788 366 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 HEATR3Q7Z4Q2 680 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 SRGAP1Q7Z6B7 1085 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 DAAM2Q86T65 1068 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 CARFQ8N187 725 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 DCBLD1Q8N8Z6 715 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ANKRD53Q8N9V6 530 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 OR7D4Q8NG98 312 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 IFI44Q8TCB0 444 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ADAMTS17Q8TE56 1095 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 DACT3Q96B18 629 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 CEP95Q96GE4 821 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 UHRF1Q96T88 793 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 MYOCQ99972 504 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 C22orf23Q9BZE7 217 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 TMEM168Q9H0V1 697 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 CD320Q9NPF0 282 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 GPRC5DQ9NZD1 345 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ABCF2Q9UG63 623 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 VWA7Q9Y334 891 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ACTL7AQ9Y615 435 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 ZMYM3Q14202 1370 aa3.96□□□□□ -1.78
SNHG1-210ENST00000539303 MYBBP1AQ9BQG0 1328 aaKnown RBP3.95□□□□□ -1.78
SNHG1-210ENST00000539303 TCAF2A6NFQ2 919 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 CAPN8A6NHC0 703 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 SGTAO43765 313 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 GPR32O75388 356 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 STC2O76061 302 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 ENDOD1O94919 500 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 HRGP04196 525 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 SBK3P0C264 359 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 PHKG2P15735 406 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 DDCP20711 480 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 GUCY1A2P33402 732 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 LINC00310P59036 64 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 NKX6-1P78426 367 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-210ENST00000539303 MTM1Q13496 603 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 PLS1Q14651 629 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 USP10Q14694 798 aaKnown RBP3.95□□□□□ -1.78
SNHG1-210ENST00000539303 C19orf54Q5BKX5 351 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 XRRA1Q6P2D8 792 aa3.95□□□□□ -1.78
SNHG1-210ENST00000539303 MAEAQ7L5Y9 396 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms