RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 MRPS35P82673 323 aaKnown RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 SCAPQ12770 1279 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 EZH2Q15910 746 aaKnown RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 TTC38Q5R3I4 469 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 CC2D1AQ6P1N0 951 aaPredicted RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 BTNL9Q6UXG8 535 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 OVCH1Q7RTY7 1134 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 VPS37DQ86XT2 251 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 C2orf69Q8N8R5 385 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 RNF169Q8NCN4 708 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 PIK3C3Q8NEB9 887 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 ACTRT2Q8TDY3 377 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 RPGRQ92834 1020 aaKnown RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 FCRL4Q96PJ5 515 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 SPATA9Q9BWV2 254 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 FOXJ2Q9P0K8 574 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 POGKQ9P215 609 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 USP36Q9P275 1121 aaKnown RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 ZNF580Q9UK33 172 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 TNPO3Q9Y5L0 923 aaKnown RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 ARAP1Q96P48 1450 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 MARCH11A6NNE9 402 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 TP73O15350 636 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 EFCAB14O75071 495 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 PROP1O75360 226 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 FSBPO95073 299 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 APOL3O95236 402 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 CELA2AP08217 269 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 GZMKP49863 264 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 KIF11P52732 1056 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 WNT3AP56704 352 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 BCAR1P56945 870 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 GABREP78334 506 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 MYBPC3Q14896 1274 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 FOXB2Q5VYV0 432 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 GPRIN1Q7Z2K8 1008 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 ST13P5Q8NFI4 369 aaPredicted RBP2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 IPO9Q96P70 1041 aaKnown RBP2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 SOX7Q9BT81 388 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 WACQ9BTA9 647 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 CELF4Q9BZC1 486 aaKnown RBP2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 MTFR1LQ9H019 292 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 MTG2Q9H4K7 406 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 SLC17A6Q9P2U8 582 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 ARPP21Q9UBL0 812 aaPredicted RBP2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 NDOR1Q9UHB4 597 aa2.86□□□□□ -1.95
CBX3P4-201ENST00000538909 LRRIQ1Q96JM4 1722 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 GOLGA3Q08378 1498 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 EFCAB5A4FU69 1503 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 WIPF3A6NGB9 483 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 ZBTB48P10074 688 aaPredicted RBP2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 TKTP29401 623 aaKnown RBP2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 PTGER1P34995 402 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 FNTBP49356 437 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 EXOSC10Q01780 885 aaKnown RBP2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 MAN2A1Q16706 1144 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 ANKS6Q68DC2 871 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 ANKS3Q6ZW76 656 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 DPF1Q92782 380 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 RGMAQ96B86 450 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 PHACTR3Q96KR7 559 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 NOL10Q9BSC4 688 aaKnown RBP2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 OSBPL6Q9BZF3 934 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 CASS4Q9NQ75 786 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 CLCA2Q9UQC9 943 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 ABCA8O94911 1581 aa2.85□□□□□ -1.95
CBX3P4-201ENST00000538909 UHRF1BP1LA0JNW5 1464 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 KDM5BQ9UGL1 1544 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 ADCY10Q96PN6 1610 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 A0A0A6YYJ9 748 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 ADCY3O60266 1144 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 DIAPH1O60610 1272 aaKnown RBP2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 APPP05067 770 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 RBP3P10745 1247 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 VAMP1P23763 118 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 CCT4P50991 539 aaKnown RBP2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 DUSP2Q05923 314 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 ADCY2Q08462 1091 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 TMEM177Q53S58 311 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 MTX3Q5HYI7 312 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 FAM102AQ5T9C2 384 aaPredicted RBP2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 EFCAB12Q6NXP0 572 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 SPATC1Q76KD6 591 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 HOMEZQ8IX15 550 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 IGSF22Q8N9C0 903 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 RNF31Q96EP0 1072 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 PDLIM2Q96JY6 352 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 ZNF48Q96MX3 618 aaPredicted RBP2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 NEU1Q99519 415 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 HEPHQ9BQS7 1158 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 BOCQ9BWV1 1114 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 SLC52A2Q9HAB3 445 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 CPNE5Q9HCH3 593 aa2.84□□□□□ -1.95
CBX3P4-201ENST00000538909 ZNF521Q96K83 1311 aa2.84□□□□□ -1.96
CBX3P4-201ENST00000538909 ARHGAP35Q9NRY4 1499 aa2.84□□□□□ -1.96
CBX3P4-201ENST00000538909 DVL2O14641 736 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 OPHN1O60890 802 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 CFIP05156 583 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 CD69Q07108 199 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 KLF9Q13886 244 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms