RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TREML2Q5T2D2 321 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 INTS8Q75QN2 995 aaKnown RBP15.7■□□□□ 0.1
CDCA3-207ENST00000538862 CTU1Q7Z7A3 348 aaKnown RBP15.7■□□□□ 0.1
CDCA3-207ENST00000538862 DDX42Q86XP3 938 aaKnown RBP eCLIP15.7■□□□□ 0.1
CDCA3-207ENST00000538862 MXRA8Q9BRK3 442 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 PAGR1Q9BTK6 254 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 TMEM206Q9H813 350 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 VCPKMTQ9H867 229 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 YY1AP1Q9H869 796 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 PPP1R9AQ9ULJ8 1098 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 HIP1RO75146 1068 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 FGGP02679 453 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 UBXN2AP68543 259 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 CETN1Q12798 172 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 MTMR2Q13614 643 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 PHLDB3Q6NSJ2 640 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 TADA2BQ86TJ2 420 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 RHOT2Q8IXI1 618 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 C12orf56Q8IXR9 622 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 DAW1Q8N136 415 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 AGPAT1Q99943 283 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 NEUROG2Q9H2A3 272 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 LARSQ9P2J5 1176 aaKnown RBP15.7■□□□□ 0.1
CDCA3-207ENST00000538862 CPA4Q9UI42 421 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 FEM1BQ9UK73 627 aa15.7■□□□□ 0.1
CDCA3-207ENST00000538862 TTI1O43156 1089 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 DAPK3O43293 454 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 CTNNA1P35221 906 aaKnown RBP15.69■□□□□ 0.1
CDCA3-207ENST00000538862 PTENP60484 403 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 SP3Q02447 781 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 AGBL2Q5U5Z8 902 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 PADI6Q6TGC4 694 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 FASTKD5Q7L8L6 764 aaKnown RBP15.69■□□□□ 0.1
CDCA3-207ENST00000538862 RAB17Q9H0T7 212 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 LOC285556D6RIA3 1793 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 PFASO15067 1338 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 IGSF9BQ9UPX0 1349 aa15.69■□□□□ 0.1
CDCA3-207ENST00000538862 FOXN3O00409 490 aaPredicted RBP15.68■□□□□ 0.1
CDCA3-207ENST00000538862 MAPK13O15264 365 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 ABCB4P21439 1286 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 SNRPFP62306 86 aaKnown RBP15.68■□□□□ 0.1
CDCA3-207ENST00000538862 GUCY1A3Q02108 690 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 ZNF844Q08AG5 666 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 PTGISQ16647 500 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 TTC31Q49AM3 519 aaPredicted RBP15.68■□□□□ 0.1
CDCA3-207ENST00000538862 NIPA1Q7RTP0 329 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 BANK1Q8NDB2 785 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 AS3MTQ9HBK9 375 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 DBR1Q9UK59 544 aaKnown RBP15.68■□□□□ 0.1
CDCA3-207ENST00000538862 GOLGA6L10A0A0M3HER8 536 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 ANKRD65E5RJM6 399 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 PMM2O15305 246 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 P4HBP07237 508 aaKnown RBP15.68■□□□□ 0.1
CDCA3-207ENST00000538862 HSD17B4P51659 736 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 ARHGAP44Q17R89 818 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 DCAF12L1Q5VU92 463 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 MIER3Q7Z3K6 550 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 TMC3Q7Z5M5 1100 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 CNPY4Q8N129 248 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 ARHGEF26Q96DR7 871 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 ACCSQ96QU6 501 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 ARHGAP39Q9C0H5 1083 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 THAP2Q9H0W7 228 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 USP20Q9Y2K6 914 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 TRIM17Q9Y577 477 aa15.68■□□□□ 0.1
CDCA3-207ENST00000538862 FAM187AA6NFU0 413 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 MIF4GDA9UHW6 222 aaKnown RBP15.67■□□□□ 0.1
CDCA3-207ENST00000538862 K7ENM7 598 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 VAMP7P51809 220 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 MCCD1P59942 119 aaPredicted RBP15.67■□□□□ 0.1
CDCA3-207ENST00000538862 DHX34Q14147 1143 aaKnown RBP15.67■□□□□ 0.1
CDCA3-207ENST00000538862 ZYXQ15942 572 aaKnown RBP15.67■□□□□ 0.1
CDCA3-207ENST00000538862 C11orf63Q6NUN7 778 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 MICALCLQ6ZW33 695 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 UBE2TQ9NPD8 197 aaPredicted RBP15.67■□□□□ 0.1
CDCA3-207ENST00000538862 GGA2Q9UJY4 613 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 AGTPBP1Q9UPW5 1226 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 EMSYQ7Z589 1322 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
CDCA3-207ENST00000538862 MYO1FO00160 1098 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 LYPLA2O95372 231 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 FLT3P36888 993 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 EPC2Q52LR7 807 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 RDH13Q8NBN7 331 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 C3orf20Q8ND61 904 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 UBLCP1Q8WVY7 318 aaPredicted RBP15.66■□□□□ 0.1
CDCA3-207ENST00000538862 PARK7Q99497 189 aaKnown RBP15.66■□□□□ 0.1
CDCA3-207ENST00000538862 CELF4Q9BZC1 486 aaKnown RBP15.66■□□□□ 0.1
CDCA3-207ENST00000538862 RABEP2Q9H5N1 569 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 SEPT11Q9NVA2 429 aaKnown RBP15.66■□□□□ 0.1
CDCA3-207ENST00000538862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.66■□□□□ 0.1
CDCA3-207ENST00000538862 TAS2R14Q9NYV8 317 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 COG5Q9UP83 839 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 SAMM50Q9Y512 469 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 ADGRA2Q96PE1 1338 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 PPFIA2O75334 1257 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 ERLIN2O94905 339 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 PLS3P13797 630 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 ITGB5P18084 799 aa15.66■□□□□ 0.1
CDCA3-207ENST00000538862 DRG2P55039 364 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms