RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ACRP10323 421 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 PROZP22891 400 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 LIG4P49917 911 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 EPHB4P54760 987 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 UBASH3AP57075 661 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 KCNJ12Q14500 433 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 KNOP1Q1ED39 458 aaKnown RBP18.82■□□□□ 0.6
CLN6-202ENST00000538696 TMEM132AQ24JP5 1023 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 UBXN11Q5T124 520 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 CNKSR3Q6P9H4 555 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 SYCP3Q8IZU3 236 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 CSGALNACT2Q8N6G5 542 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 TSG101Q99816 390 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 KCTD10Q9H3F6 313 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 PTPRHQ9HD43 1115 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 TNFSF13BQ9Y275 285 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 A0A1B0GUA9 196 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 N4BP3O15049 544 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 TGFB1I1O43294 461 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 KIF20AO95235 890 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
CLN6-202ENST00000538696 LRRC63Q05C16 580 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 KRT31Q15323 416 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 RALGAPA2Q2PPJ7 1873 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 NOTUMQ6P988 496 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 LRRC55Q6ZSA7 311 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 C16orf59Q7L2K0 433 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 RPUSD2Q8IZ73 545 aaKnown RBP18.81■□□□□ 0.6
CLN6-202ENST00000538696 CCDC51Q96ER9 411 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 ZBTB45Q96K62 511 aaPredicted RBP18.81■□□□□ 0.6
CLN6-202ENST00000538696 HAPLN2Q9GZV7 340 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 CHST12Q9NRB3 414 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 TAB2Q9NYJ8 693 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 LIMA1Q9UHB6 759 aaKnown RBP18.81■□□□□ 0.6
CLN6-202ENST00000538696 CITO14578 2027 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 ANK1P16157 1881 aa18.81■□□□□ 0.6
CLN6-202ENST00000538696 SPAG1Q07617 926 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 NCBP1Q09161 790 aaKnown RBP18.8■□□□□ 0.6
CLN6-202ENST00000538696 TCP11X2Q5H9J9 407 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 FOXR2Q6PJQ5 311 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 MPZL3Q6UWV2 235 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 RTN4RL1Q86UN2 441 aaPredicted RBP18.8■□□□□ 0.6
CLN6-202ENST00000538696 DRC7Q8IY82 874 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 LBHD1Q9BQE6 289 aaPredicted RBP18.8■□□□□ 0.6
CLN6-202ENST00000538696 FTHL17Q9BXU8 183 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 EIF2AQ9BY44 585 aaKnown RBP18.8■□□□□ 0.6
CLN6-202ENST00000538696 GBP3Q9H0R5 595 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 CDT1Q9H211 546 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 TYW1Q9NV66 732 aaKnown RBP18.8■□□□□ 0.6
CLN6-202ENST00000538696 ANKFY1Q9P2R3 1169 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 STYXL1Q9Y6J8 313 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 TTC3P53804 2025 aa18.8■□□□□ 0.6
CLN6-202ENST00000538696 A0A1B0GTH6 734 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 TOM1L1O75674 476 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 NPTXRO95502 500 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 ZSCAN20P17040 1043 aaPredicted RBP18.79■□□□□ 0.6
CLN6-202ENST00000538696 MAGEA10P43363 369 aaPredicted RBP18.79■□□□□ 0.6
CLN6-202ENST00000538696 COPB1P53618 953 aaKnown RBP18.79■□□□□ 0.6
CLN6-202ENST00000538696 ZNF568Q3ZCX4 644 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 TWF2Q6IBS0 349 aaKnown RBP18.79■□□□□ 0.6
CLN6-202ENST00000538696 SLC27A1Q6PCB7 646 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 EEF2KMTQ96G04 330 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 ADAM2Q99965 735 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 AGPAT3Q9NRZ7 376 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 RGS18Q9NS28 235 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 PDCD11Q14690 1871 aaKnown RBP18.79■□□□□ 0.6
CLN6-202ENST00000538696 TRIP11Q15643 1979 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 PDE4DIPQ5VU43 2346 aa18.79■□□□□ 0.6
CLN6-202ENST00000538696 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.78■□□□□ 0.6
CLN6-202ENST00000538696 HARSP12081 509 aaKnown RBP18.78■□□□□ 0.6
CLN6-202ENST00000538696 ADSSP30520 456 aa18.78■□□□□ 0.6
CLN6-202ENST00000538696 MCL1Q07820 350 aa18.78■□□□□ 0.6
CLN6-202ENST00000538696 NOLC1Q14978 699 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLN6-202ENST00000538696 PTPN21Q16825 1174 aa18.78■□□□□ 0.6
CLN6-202ENST00000538696 DCAF4L1Q3SXM0 396 aa18.78■□□□□ 0.6
CLN6-202ENST00000538696 ZBTB33Q86T24 672 aa18.78■□□□□ 0.6
CLN6-202ENST00000538696 ZC3H3Q8IXZ2 948 aaKnown RBP18.78■□□□□ 0.6
CLN6-202ENST00000538696 CNOT6LQ96LI5 555 aaKnown RBP18.78■□□□□ 0.6
CLN6-202ENST00000538696 CBWD1Q9BRT8 395 aa18.78■□□□□ 0.6
CLN6-202ENST00000538696 TSPYL2Q9H2G4 693 aaPredicted RBP18.78■□□□□ 0.6
CLN6-202ENST00000538696 MAGEC2Q9UBF1 373 aaPredicted RBP18.78■□□□□ 0.6
CLN6-202ENST00000538696 TRAF3IP3Q9Y228 551 aa18.78■□□□□ 0.6
CLN6-202ENST00000538696 C9IYK1 514 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 H0YGN5 161 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 PDXKO00764 312 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 CLIC2O15247 247 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 MCF2P10911 925 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 EEF1GP26641 437 aaKnown RBP18.77■□□□□ 0.6
CLN6-202ENST00000538696 IKBKEQ14164 716 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 TMEM240Q5SV17 173 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 ARMCX5Q6P1M9 558 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 PSRC1Q6PGN9 363 aaPredicted RBP18.77■□□□□ 0.6
CLN6-202ENST00000538696 FAM43BQ6ZT52 329 aaPredicted RBP18.77■□□□□ 0.6
CLN6-202ENST00000538696 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 HS2ST1Q7LGA3 356 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 CREBRFQ8IUR6 639 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 FAM114A1Q8IWE2 563 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 ANKRD20A12PQ8NF67 263 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms