RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CD302Q8IX05 232 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 RDM1Q8NG50 284 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 SHC3Q92529 594 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 ATP6V0A1Q93050 837 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 GRIN2DO15399 1336 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 PMM2O15305 246 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 TMEM132BQ14DG7 1078 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 XRRA1Q6P2D8 792 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 DHX38Q92620 1227 aaKnown RBP26.82■■□□□ 1.88
RAB40C-204ENST00000538492 CENPHQ9H3R5 247 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 AS3MTQ9HBK9 375 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 TMEM8AQ9HCN3 771 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 RLFQ13129 1914 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 STBD1O95210 358 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 HADHBP55084 474 aaKnown RBP26.82■■□□□ 1.88
RAB40C-204ENST00000538492 PTENP60484 403 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 FMO1Q01740 532 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 PDCLQ13371 301 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 CCDC60Q8IWA6 550 aaPredicted RBP26.82■■□□□ 1.88
RAB40C-204ENST00000538492 HELQQ8TDG4 1101 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 SENP7Q9BQF6 1050 aa26.82■■□□□ 1.88
RAB40C-204ENST00000538492 JPH1Q9HDC5 661 aaPredicted RBP26.82■■□□□ 1.88
RAB40C-204ENST00000538492 RRP15Q9Y3B9 282 aaKnown RBP26.82■■□□□ 1.88
RAB40C-204ENST00000538492 C11orf63Q6NUN7 778 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 SRLQ86TD4 932 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 FBXL13Q8NEE6 735 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 GLG1Q92896 1179 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 LRRC45Q96CN5 670 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 BTBD6Q96KE9 485 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 NTPCRQ9BSD7 190 aaKnown RBP26.81■■□□□ 1.88
RAB40C-204ENST00000538492 PHIPQ8WWQ0 1821 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 COMTP21964 271 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 DSG3P32926 999 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 UBLCP1Q8WVY7 318 aaPredicted RBP26.81■■□□□ 1.88
RAB40C-204ENST00000538492 HVCN1Q96D96 273 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 BICD1Q96G01 975 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 NAP1L3Q99457 506 aaPredicted RBP26.81■■□□□ 1.88
RAB40C-204ENST00000538492 RAB20Q9NX57 234 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 USP20Q9Y2K6 914 aa26.81■■□□□ 1.88
RAB40C-204ENST00000538492 GOLGA6L10A0A0M3HER8 536 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 PSAPP07602 524 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 CYP11B1P15538 503 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 CTNNA1P35221 906 aaKnown RBP26.8■■□□□ 1.88
RAB40C-204ENST00000538492 DR1Q01658 176 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 PRKCEQ02156 737 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 CPNE8Q86YQ8 564 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 SPIRE2Q8WWL2 714 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 TATDN2Q93075 761 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 NT5C1BQ96P26 610 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 PI4K2AQ9BTU6 479 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 XPNPEP1Q9NQW7 623 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 ARID2Q68CP9 1835 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 TULP2O00295 520 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 EIF3HO15372 352 aaKnown RBP eCLIP26.8■■□□□ 1.88
RAB40C-204ENST00000538492 MAFGO15525 162 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 CALCAP01258 141 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 GPC3P51654 580 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 SKOR1P84550 965 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 CYP24A1Q07973 514 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 ANGEL2Q5VTE6 544 aaKnown RBP26.8■■□□□ 1.88
RAB40C-204ENST00000538492 SV2AQ7L0J3 742 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 ATP6V1G3Q96LB4 118 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 MFSD14AQ96MC6 490 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 FAM213AQ9BRX8 229 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 SLC9A2Q9UBY0 812 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 COQ4Q9Y3A0 265 aa26.8■■□□□ 1.88
RAB40C-204ENST00000538492 ACTR2P61160 394 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 UBL4BQ8N7F7 174 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 SEC14L1Q92503 715 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 ZSWIM1Q9BR11 485 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 A1CFQ9NQ94 594 aaKnown RBP26.79■■□□□ 1.88
RAB40C-204ENST00000538492 CYP39A1Q9NYL5 469 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 ZNFX1Q9P2E3 1918 aaKnown RBP26.79■■□□□ 1.88
RAB40C-204ENST00000538492 GZMAP12544 262 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 BCAS4Q8TDM0 211 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 FBXL18Q96ME1 805 aa26.79■■□□□ 1.88
RAB40C-204ENST00000538492 DGAT1O75907 488 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 PDE6CP51160 858 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 NUP85Q9BW27 656 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 CYP26B1Q9NR63 512 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 FAM114A2Q9NRY5 505 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 ZNF112Q9UJU3 913 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 MIF4GDA9UHW6 222 aaKnown RBP26.78■■□□□ 1.88
RAB40C-204ENST00000538492 NR1D1P20393 614 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 MTERF2Q49AM1 385 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 GPD1LQ8N335 351 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 TMC2Q8TDI7 906 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 ZNF653Q96CK0 615 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 C17orf75Q9HAS0 396 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 TRPC6Q9Y210 931 aa26.78■■□□□ 1.88
RAB40C-204ENST00000538492 GOLGA6L10A6NI86 522 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 ANKRD65E5RJM6 399 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 H0YGN5 161 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 MYO1CO00159 1063 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 LMBRD2Q68DH5 695 aaPredicted RBP26.77■■□□□ 1.88
RAB40C-204ENST00000538492 TAS1R3Q7RTX0 852 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 TMC3Q7Z5M5 1100 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 ZNF564Q8TBZ8 553 aaPredicted RBP26.77■■□□□ 1.88
RAB40C-204ENST00000538492 ATP8B4Q8TF62 1192 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 POLR3FQ9H1D9 316 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms