RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ZAP70P43403 619 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 PEX5P50542 639 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 TIMM10P62072 90 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 OCRLQ01968 901 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 MLLT1Q03111 559 aaPredicted RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 TRIM28Q13263 835 aaKnown RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 KPNB1Q14974 876 aaKnown RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 SPRED3Q2MJR0 410 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 THEMIS2Q5TEJ8 643 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 SFMBT2Q5VUG0 894 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 C20orf204Q6ZNR8 217 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 UNC13DQ70J99 1090 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 SLFN11Q7Z7L1 901 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 LCA5Q86VQ0 697 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 NCAPG2Q86XI2 1143 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 SMYD4Q8IYR2 804 aaPredicted RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 ZNF654Q8IZM8 581 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 RBBP8NLQ8NC74 664 aaPredicted RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 STKLD1Q8NE28 680 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 NEK9Q8TD19 979 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 UBLCP1Q8WVY7 318 aaPredicted RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 LPIN2Q92539 896 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 ANKS1AQ92625 1134 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 MAML3Q96JK9 1138 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 NR1H4Q96RI1 486 aaPredicted RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 TIPINQ9BVW5 301 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 PUS7LQ9H0K6 701 aaKnown RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 DCLRE1BQ9H816 532 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 MLXIPQ9HAP2 919 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 USP40Q9NVE5 1235 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 NDUFA13Q9P0J0 144 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 ADAM22Q9P0K1 906 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 ZSWIM5Q9P217 1185 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 ATXN10Q9UBB4 475 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 STOML1Q9UBI4 398 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 RASAL2Q9UJF2 1139 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 KCNJ14Q9UNX9 436 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 ATP6V0A2Q9Y487 856 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 TOGARAM1Q9Y4F4 1720 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 C10orf71Q711Q0 1435 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 DPPA5A6NC42 116 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 TMEM88BA6NKF7 163 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 UBAP1LF5GYI3 381 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 IGF2BP3O00425 579 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP28-207ENST00000538475 PODXLO00592 558 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 RGS16O15492 202 aaPredicted RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 PALMO75781 387 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 UBOX5O94941 541 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 UNC5CO95185 931 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 GGPS1O95749 300 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 PSAPP07602 524 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 SPATA31C1P0DKV0 1188 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 CHN1P15882 459 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 PCK1P35558 622 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 FKBP4Q02790 459 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP28-207ENST00000538475 RNASELQ05823 741 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 AIMP1Q12904 312 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 PLS1Q14651 629 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 DENND2CQ68D51 928 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 ANO7Q6IWH7 933 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 ELMSAN1Q6PJG2 1045 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 MPRIPQ6WCQ1 1025 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 FAM43BQ6ZT52 329 aaPredicted RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 ANKRD23Q86SG2 305 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 RAB11FIP4Q86YS3 637 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 LRRC34Q8IZ02 419 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 GUF1Q8N442 669 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 GPR152Q8TDT2 470 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 ATP8B4Q8TF62 1192 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 KIFAP3Q92845 792 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 GFM2Q969S9 779 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 MTMR8Q96EF0 704 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 BORCS6Q96GS4 357 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 STRBPQ96SI9 672 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 FMO2Q99518 471 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 SPOCK3Q9BQ16 436 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 NAPBQ9H115 298 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 LRMDAQ9H2I8 198 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 TAOK3Q9H2K8 898 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 ZWILCHQ9H900 591 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 ATP8A2Q9NTI2 1148 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 CYP39A1Q9NYL5 469 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 KLHL14Q9P2G3 628 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 MTRF1LQ9UGC7 380 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 PRKAG3Q9UGI9 489 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 FNDC3AQ9Y2H6 1198 aaKnown RBP7.22□□□□□ -1.25
USP28-207ENST00000538475 L3MBTL1Q9Y468 752 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 ACTL7BQ9Y614 415 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 KCNMB2Q9Y691 235 aa7.22□□□□□ -1.25
USP28-207ENST00000538475 TNRQ92752 1358 aa7.21□□□□□ -1.25
USP28-207ENST00000538475 KIAA1551Q9HCM1 1747 aa7.21□□□□□ -1.25
USP28-207ENST00000538475 GLI3P10071 1580 aa7.21□□□□□ -1.25
USP28-207ENST00000538475 PAPPAQ13219 1627 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 MAGEA13PA6NCF6 341 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 BTBD19C9JJ37 291 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 CAND2O75155 1236 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 SKAP2O75563 359 aaPredicted RBP7.21□□□□□ -1.26
USP28-207ENST00000538475 TCEA3O75764 348 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms