RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MPZL3Q6UWV2 235 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FRMD5Q7Z6J6 570 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 THNSL1Q8IYQ7 743 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 HACE1Q8IYU2 909 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FNBP1Q96RU3 617 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ACO2Q99798 780 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CBWD1Q9BRT8 395 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CRISPLD2Q9H0B8 497 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 IKZF4Q9H2S9 585 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FZD8Q9H461 694 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MMRN2Q9H8L6 949 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CDHR5Q9HBB8 845 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 IFT122Q9HBG6 1241 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 KIAA0100Q14667 2235 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SCN10AQ9Y5Y9 1956 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TISP43B9A030 160 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 EXTL3O43909 919 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 B4GALT4O60513 344 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CAND2O75155 1236 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GPR32O75388 356 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZNF75DP51815 510 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 YARSP54577 528 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 OSTNP61366 133 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MLLT1Q03111 559 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PAK2Q13177 524 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NOLC1Q14978 699 aaKnown RBP eCLIP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NFIL3Q16649 462 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 VWA3BQ502W6 1294 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 IER5LQ5T953 404 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TWF2Q6IBS0 349 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TSHZ1Q6ZSZ6 1077 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 INTS8Q75QN2 995 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PPFIBP1Q86W92 1011 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SLC9A9Q8IVB4 645 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CAGE1Q8TC20 777 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PAWRQ96IZ0 340 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZBTB45Q96K62 511 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MKNK1Q9BUB5 465 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CCDC94Q9BW85 323 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 XPO4Q9C0E2 1151 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MINDY3Q9H8M7 445 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 RPF1Q9H9Y2 349 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZMYM2Q9UBW7 1377 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 OGTO15294 1046 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 B4GALT5O43286 388 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PHACTR2O75167 634 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NPTXRO95502 500 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PIGRP01833 764 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MCF2P10911 925 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TNNI1P19237 187 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 HOXC8P31273 242 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CASP4P49662 377 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ACOT2P49753 483 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 VAMP7P51809 220 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SURF1Q15526 300 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SNRNP35Q16560 246 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FAM187BQ17R55 369 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 DCAF4L1Q3SXM0 396 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZNF618Q5T7W0 954 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SARM1Q6SZW1 724 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CDR2LQ86X02 465 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 C12orf56Q8IXR9 622 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SPC24Q8NBT2 197 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MED15Q96RN5 788 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CCDC113Q9H0I3 377 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 RBAKQ9NYW8 714 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PRKAG2Q9UGJ0 569 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NOC2LQ9Y3T9 749 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ALPK3Q96L96 1907 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 A0A0B4J269 797 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TSPAN1O60635 241 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 N4BP1O75113 896 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 AKAP3O75969 853 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 DLATP10515 647 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GHRP10912 638 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CKBP12277 381 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SELPP16109 830 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZNF18P17022 549 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TLE2Q04725 743 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CCDC173Q0VFZ6 552 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TRIM60Q495X7 471 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SLC27A1Q6PCB7 646 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 LRRC55Q6ZSA7 311 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 LRRC8DQ7L1W4 858 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TMC6Q7Z403 805 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 USP38Q8NB14 1042 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms