RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 EIF2AQ9BY44 585 aaKnown RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 SMARCAD1Q9H4L7 1026 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 INTUQ9ULD6 942 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 A0A087WUV0 522 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 DGAT1O75907 488 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 MMEP08473 750 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 TEKT4Q8WW24 435 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 LBHD1Q9BQE6 289 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 OSBPL5Q9H0X9 879 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 HACL1Q9UJ83 578 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 F5H423 210 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 DFFAO00273 331 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 DYNC1LI2O43237 492 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 TRIM28Q13263 835 aaKnown RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 SGMS1Q86VZ5 419 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 RAPGEF5Q92565 580 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 ZFYVE28Q9HCC9 887 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 TADA2AO75478 443 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 C6orf222P0C671 652 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 ZNF157P51786 506 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 PLEKHA5Q9HAU0 1116 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 ZC3H4Q9UPT8 1303 aaKnown RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 ST8SIA6P61647 398 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 ZNF211Q13398 564 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 PID1Q7Z2X4 250 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 ASAP3Q8TDY4 903 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 ELAC2Q9BQ52 826 aaKnown RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 KIFC3Q9BVG8 833 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 TMEM60Q9H2L4 133 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 SCOCQ9UIL1 159 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 PP2D1A8MPX8 630 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 KIF28PB7ZC32 967 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 KRT14P02533 472 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 STILQ15468 1287 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 WDR72Q3MJ13 1102 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 FRMD5Q7Z6J6 570 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 GTF3C2Q8WUA4 911 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 DCUN1D1Q96GG9 259 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 SUFUQ9UMX1 484 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 GH1P01241 217 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 DDX5P17844 614 aaKnown RBP17.81■□□□□ 0.44
SCARB1-205ENST00000538291 RBP5P82980 135 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 E2F5Q15329 346 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 APPL2Q8NEU8 664 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 COG4Q9H9E3 785 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 DAGLAQ9Y4D2 1042 aa17.81■□□□□ 0.44
SCARB1-205ENST00000538291 A0A0G2JLW4 131 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 APOL1O14791 398 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 SPAG7O75391 227 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 ACBD5Q5T8D3 534 aaPredicted RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 HIBCHQ6NVY1 386 aaPredicted RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 HIPK4Q8NE63 616 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 BPIFA3Q9BQP9 254 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 ASPSCR1Q9BZE9 553 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 KIF1BO60333 1816 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 EEF1DP29692 281 aaKnown RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 MRPS25P82663 173 aaKnown RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 BAATQ14032 418 aaPredicted RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 IER5Q5VY09 327 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 CASS4Q9NQ75 786 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 PDXKO00764 312 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 ENTPD3O75355 529 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 RPSAP08865 295 aaKnown RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 CLCN6P51797 869 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 PDIA2Q13087 525 aaKnown RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 PDIA5Q14554 519 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 ATP11CQ8NB49 1132 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 AGAP1Q9UPQ3 857 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 TPI1P60174 286 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 ATP2C1P98194 919 aaPredicted RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 TEDDM1Q5T9Z0 273 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 RNF168Q8IYW5 571 aaPredicted RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 TRPC7Q9HCX4 862 aa17.8■□□□□ 0.44
SCARB1-205ENST00000538291 RRP15Q9Y3B9 282 aaKnown RBP17.8■□□□□ 0.44
SCARB1-205ENST00000538291 PMS2P54278 862 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 FMR1NBQ8N0W7 255 aaPredicted RBP17.79■□□□□ 0.44
SCARB1-205ENST00000538291 NSUN4Q96CB9 384 aaKnown RBP17.79■□□□□ 0.44
SCARB1-205ENST00000538291 MTBPQ96DY7 904 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.443e-8■■■□□ 15.6
SCARB1-205ENST00000538291 SCHIP1Q9P0W5 487 aaPredicted RBP17.79■□□□□ 0.44
SCARB1-205ENST00000538291 PCDHB8Q9UN66 801 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 JCADQ9P266 1359 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 GYG2O15488 501 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 RARBP10826 455 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 AIPL1Q9NZN9 384 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 PCDHGB4Q9UN71 923 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 MAGEB2O15479 319 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 SRGAP2O75044 1071 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 PRR29P0C7W0 189 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 HDLBPQ00341 1268 aaKnown RBP17.79■□□□□ 0.44
SCARB1-205ENST00000538291 FAM47EQ6ZV65 393 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 DDX53Q86TM3 631 aaKnown RBP17.79■□□□□ 0.44
SCARB1-205ENST00000538291 GLYCTKQ8IVS8 523 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 MTMR4Q9NYA4 1195 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms