RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 LAMTOR4Q0VGL1 99 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 NFX1Q12986 1120 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 GRIK3Q13003 919 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 NFIL3Q16649 462 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 LRRC26Q2I0M4 334 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MAP9Q49MG5 647 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PLEKHG4Q58EX7 1191 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 POTEEQ6S8J3 1075 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MPZL3Q6UWV2 235 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 NYAP1Q6ZVC0 841 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 RASGRP2Q7LDG7 609 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 SPRYD3Q8NCJ5 442 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 HDAC7Q8WUI4 952 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 DNAJB3Q8WWF6 145 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 P2RX5Q93086 422 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ANKRD36BP1Q96IX9 119 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 NLRP4Q96MN2 994 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 FNBP1Q96RU3 617 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MIS12Q9H081 205 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 DZANK1Q9NVP4 752 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ASTN1O14525 1302 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 SPDYE4A6NLX3 237 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 B4GALT4O60513 344 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 TPM1P09493 284 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MCCD1P59942 119 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 KCNA1Q09470 495 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MYO1EQ12965 1108 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PTPAQ15257 358 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MAPRE1Q15691 268 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ZSCAN26Q16670 478 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ATF7IP2Q5U623 682 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CDCA2Q69YH5 1023 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 GDF6Q6KF10 455 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 RINT1Q6NUQ1 792 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 C12orf56Q8IXR9 622 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 KIAA0319LQ8IZA0 1049 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 TXLNBQ8N3L3 684 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 GUF1Q8N442 669 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 C4orf32Q8N8J7 132 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM169Q96HH4 297 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CEP295NLQ96MC4 621 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CEP63Q96MT8 703 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ACAP3Q96P50 834 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 TGS1Q96RS0 853 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 EMILIN2Q9BXX0 1053 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PPP1R12CQ9BZL4 782 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ERVK-5Q9HDB9 667 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 RGS18Q9NS28 235 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CALCOCO1Q9P1Z2 691 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PIN4Q9Y237 131 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 LRRC37A2A6NM11 1700 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 RLFQ13129 1914 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF233A6NK53 670 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PDXKO00764 312 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 HNRNPDLO14979 420 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 OGTO15294 1046 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 SLC16A3O15427 465 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 P4HA2O15460 535 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 TLL1O43897 1013 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 HIP1RO75146 1068 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 GTF2H1P32780 548 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 GRM5P41594 1212 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ALDH7A1P49419 539 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PDE6CP51160 858 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF131P52739 623 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ADAM17P78536 824 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 IFT88Q13099 833 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 BTG3Q14201 252 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 NOLC1Q14978 699 aaKnown RBP eCLIP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 EDRF1Q3B7T1 1238 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF568Q3ZCX4 644 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 HAUS6Q7Z4H7 955 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 THEM5Q8N1Q8 247 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 MSANTD4Q8NCY6 345 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 PRPF31Q8WWY3 499 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 DHX58Q96C10 678 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 CTAGE1Q96RT6 745 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 RSAD1Q9HA92 442 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 AGPAT5Q9NUQ2 364 aa3.89□□□□□ -1.79
PTPN22-211ENST00000538253 TYW1Q9NV66 732 aaKnown RBP3.89□□□□□ -1.79
PTPN22-211ENST00000538253 EP400Q96L91 3159 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 A0A0U1RQF3 1178 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TREHO43280 583 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GCNT3O95395 438 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 RFX1P22670 979 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ATICP31939 592 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 FLT3P36888 993 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GYS2P54840 703 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SLC8A3P57103 927 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PSMC6P62333 389 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SP2Q02086 613 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CEBPZQ03701 1054 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 DNM1Q05193 864 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SPIRE1Q08AE8 756 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC183Q5T5S1 534 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ARMCX5Q6P1M9 558 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 RUFY4Q6ZNE9 571 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 INTS8Q75QN2 995 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 MRPL10Q7Z7H8 261 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TRIM74Q86UV6 250 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms