RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 STAM2O75886 525 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 SPATA31C1P0DKV0 1188 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 PLS3P13797 630 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 GBP2P32456 591 aaPredicted RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 GPC3P51654 580 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 ADKP55263 362 aaKnown RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 DEFB103AP81534 67 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 MYL5Q02045 173 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 TMEM270Q6UE05 265 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 METTL23Q86XA0 190 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 ZSWIM2Q8NEG5 633 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 C18orf25Q96B23 403 aaPredicted RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.83□□□□□ -1.167e-7■■□□□ 13.6
MSH6-209ENST00000538136 CYP4F11Q9HBI6 524 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 TUFT1Q9NNX1 390 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 FNDC3AQ9Y2H6 1198 aaKnown RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 ANKRD63C9JTQ0 380 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 STX10O60499 249 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 AMHP03971 560 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 NOLC1Q14978 699 aaKnown RBP eCLIP7.83□□□□□ -1.16
MSH6-209ENST00000538136 PTPAQ15257 358 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 ZNF699Q32M78 642 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 FAM109BQ6ICB4 259 aaPredicted RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 TMEM192Q8IY95 271 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 ZNF333Q96JL9 665 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 OSBPL7Q9BZF2 842 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 RSAD1Q9HA92 442 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 HSPBP1Q9NZL4 362 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 SYNGAP1Q96PV0 1343 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 CEP250Q9BV73 2442 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 SPTAN1Q13813 2472 aaKnown RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 TTLL13PA6NNM8 815 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 AGRPO00253 132 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 PIK3CDO00329 1044 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 CABYRO75952 493 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 THP07101 528 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 GJA8P48165 433 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 SLC8A3P57103 927 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 PDIA5Q14554 519 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 ZNF667Q5HYK9 610 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 LIN9Q5TKA1 542 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 RESP18Q5W5W9 173 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 GJB7Q6PEY0 223 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 LRSAM1Q6UWE0 723 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 GIPC2Q8TF65 315 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 WNT8BQ93098 351 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 PCDHB12Q9Y5F1 795 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 MOXD2PA6NHM9 499 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 DNM1LO00429 736 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 AFF1P51825 1210 aaKnown RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 EVCP57679 992 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 GIT2Q14161 759 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 SHHQ15465 462 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 KLHL40Q2TBA0 621 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 AXDND1Q5T1B0 1012 aaPredicted RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 C4orf19Q8IY42 314 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 C12orf76Q8N812 135 aaPredicted RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 ZNF397Q8NF99 534 aaPredicted RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 TMEM40Q8WWA1 233 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 ZNF512Q96ME7 567 aaPredicted RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 TYW1Q9NV66 732 aaKnown RBP7.83□□□□□ -1.16
MSH6-209ENST00000538136 CLDND1Q9NY35 253 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 GTF2IRD1Q9UHL9 959 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 TBX20Q9UMR3 447 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 EMSYQ7Z589 1322 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 MYO5AQ9Y4I1 1855 aaKnown RBP7.82□□□□□ -1.16
MSH6-209ENST00000538136 A6NJR5 290 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 SOAT2O75908 522 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 ADCY5O95622 1261 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 SKILP12757 684 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 FKBP3Q00688 224 aaKnown RBP7.82□□□□□ -1.16
MSH6-209ENST00000538136 TMEM132DQ14C87 1099 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 KNOP1Q1ED39 458 aaKnown RBP7.82□□□□□ -1.16
MSH6-209ENST00000538136 Q4G0T1 1027 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 ANKRD40Q6AI12 368 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 P2RX5Q93086 422 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 PLCB1Q9NQ66 1216 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 PRMT7Q9NVM4 692 aaPredicted RBP7.82□□□□□ -1.16
MSH6-209ENST00000538136 HESX1Q9UBX0 185 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 SLC45A1Q9Y2W3 748 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 KCNJ18B7U540 433 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 THAP12O43422 761 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 GFPT2O94808 682 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 GNRH1P01148 92 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 MYL4P12829 197 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 ZNF18P17022 549 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 KCNA5P22460 613 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 PSMC2P35998 433 aaKnown RBP7.82□□□□□ -1.16
MSH6-209ENST00000538136 GRIK1P39086 918 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 NT5C2P49902 561 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 KCNJ12Q14500 433 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 SNRNP35Q16560 246 aaKnown RBP7.82□□□□□ -1.16
MSH6-209ENST00000538136 UNC13DQ70J99 1090 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 SYT2Q8N9I0 419 aaPredicted RBP7.82□□□□□ -1.16
MSH6-209ENST00000538136 BEST2Q8NFU1 509 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 TUBGCP2Q9BSJ2 902 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 C16orf70Q9BSU1 422 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 C2orf40Q9H1Z8 148 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 SUDS3Q9H7L9 328 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms