RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PRCPP42785 496 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 GALK1P51570 392 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 ITGA7Q13683 1181 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 PDCD4Q53EL6 469 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 GADL1Q6ZQY3 521 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 ARHGEF18Q6ZSZ5 1173 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 DAAM2Q86T65 1068 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 BHMTQ93088 406 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 TTYH3Q9C0H2 523 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 DHX36Q9H2U1 1008 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 DENND2DQ9H6A0 471 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 TDRD3Q9H7E2 651 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 PARP2Q9UGN5 583 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 SYNPO2Q9UMS6 1093 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 RASA1P20936 1047 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 S100A1P23297 94 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 PTPN4P29074 926 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 C1QTNF8P60827 252 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 GSTM4Q03013 218 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 STRN3Q13033 797 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 UNC13DQ70J99 1090 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 CNOT6LQ96LI5 555 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 NEUROG2Q9H2A3 272 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 ARHGAP20Q9P2F6 1191 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 SAP30BPQ9UHR5 308 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 LNPEPQ9UIQ6 1025 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 B4E1Z4 1266 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 NDC80O14777 642 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 PABPC4LP0CB38 370 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 SLC1A4P43007 532 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 IFI35P80217 286 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 NOGQ13253 232 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 CLPPQ16740 277 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 CCDC153Q494R4 210 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 PATL1Q86TB9 770 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 AMIGO3Q86WK7 504 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 ACTRT1Q8TDG2 376 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 UTP4Q969X6 686 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 VAT1LQ9HCJ6 419 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 TRIM49BA6NDI0 452 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 BTBD19C9JJ37 291 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 CBFA2T3O75081 653 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 HNRNPH3P31942 346 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 FLT3P36888 993 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 ACADVLP49748 655 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 DGCR14Q96DF8 476 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 RUNDC3BQ96NL0 473 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 ERGIC2Q96RQ1 377 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 TMEM60Q9H2L4 133 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 FAM207AQ9NSI2 230 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 SSU72P8A0A1W2PR75 194 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 ARHGAP10A1A4S6 786 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 PPP1R2P41236 205 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 GFPT1Q06210 699 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 NAB2Q15742 525 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 SEPT7Q16181 437 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 RTN1Q16799 776 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 PPP1R21Q6ZMI0 780 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 SLC15A3Q8IY34 581 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 GDAP1Q8TB36 358 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 ZKSCAN3Q9BRR0 538 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 KCNJ14Q9UNX9 436 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 GDAQ9Y2T3 454 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 PPP2R3BQ9Y5P8 575 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 SNAP23O00161 211 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 STRNO43815 780 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 EYA4O95677 639 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 SLCO1A2P46721 670 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 TOB1P50616 345 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 PLOD1Q02809 727 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 LRRC8BQ6P9F7 803 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 NELFCDQ8IXH7 590 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 NT5C3AQ9H0P0 336 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 AMACRQ9UHK6 382 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 NOC2LQ9Y3T9 749 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 PITPNM2Q9BZ72 1349 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 PSMG1O95456 288 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 KLK7P49862 253 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 FOXO4P98177 505 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 IL9RQ01113 521 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 SPIDRQ14159 915 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 ADSSL1Q8N142 457 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 DIS3LQ8TF46 1054 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 C4BP0C0L5 1744 aa11.59□□□□□ -0.55
CLSTN3-207ENST00000537408 TMEM120BA0PK00 339 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ADCY3O60266 1144 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 PRDM1O75626 825 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 CIB2O75838 187 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms