RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CYP4F11Q9HBI6 524 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 TMEM165Q9HC07 324 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 STK17AQ9UEE5 414 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 RPS6KL1Q9Y6S9 549 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PFASO15067 1338 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 FMN2Q9NZ56 1722 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 A0A0U1RQJ8 604 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PP2D1A8MPX8 630 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 RARGP13631 454 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PTPN4P29074 926 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 TMED10P49755 219 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 YARSP54577 528 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 MED21Q13503 144 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 SLC45A4Q5BKX6 768 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 GUF1Q8N442 669 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 LPIN2Q92539 896 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 EIF2AQ9BY44 585 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 SPON1Q9HCB6 807 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 NR2E3Q9Y5X4 410 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CAPN6Q9Y6Q1 641 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 KDM3AQ9Y4C1 1321 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ARHGEF35A5YM69 484 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 CDH16O75309 829 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TCEA3O75764 348 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF189O75820 626 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 GSTT1P30711 240 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 MAPK4P31152 587 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 INHBEP58166 350 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 DYNLT1P63172 113 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TUBA4AP68366 448 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 FAM83BQ5T0W9 1011 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TTBK2Q6IQ55 1244 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 KIAA1024Q9UPX6 916 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 LMO7Q8WWI1 1683 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 H0YGN5 161 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 GIPC1O14908 333 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 UBOX5O94941 541 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 KRT1P04264 644 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TMPRSS15P98073 1019 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 SP4Q02446 784 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 R3HDM1Q15032 1099 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 BBS9Q3SYG4 887 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TPH2Q8IWU9 490 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 USP6NLQ92738 828 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC124Q96CT7 223 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 CELF4Q9BZC1 486 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 UNC45AQ9H3U1 944 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PFDN4Q9NQP4 134 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 DENND2AQ9ULE3 1009 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 STARD13Q9Y3M8 1113 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 NFS1Q9Y697 457 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 STK24Q9Y6E0 443 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PIK3C2AO00443 1686 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 FRMPD2Q68DX3 1309 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 USP17L12C9JPN9 530 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 USP17L21D6R901 530 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 SLC34A1Q06495 639 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TRMT5Q32P41 509 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 MARK2Q7KZI7 788 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 AFAP1L2Q8N4X5 818 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF496Q96IT1 587 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 VPS50Q96JG6 964 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 DCAF5Q96JK2 942 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 HAUS8Q9BT25 410 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 HEMGNQ9BXL5 484 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 DPPA5A6NC42 116 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 FAM205CA6NFA0 338 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ATP9AO75110 1047 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PHF2O75151 1096 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PDE5AO76074 875 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ENO1P06733 434 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 GJA8P48165 433 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PTPN12Q05209 780 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ASRGL1Q7L266 308 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TTC25Q96NG3 672 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ZCWPW1Q9H0M4 648 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 STX18Q9P2W9 335 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TMEM120BA0PK00 339 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 C6orf229H3BNL8 230 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 NOP56O00567 594 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ADCY3O60266 1144 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 SAT1P21673 171 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 S100A1P23297 94 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 NSFP46459 744 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 CACNA2D1P54289 1103 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 IL1RL1Q01638 556 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 KDSRQ06136 332 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 THOC5Q13769 683 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 MTFR1Q15390 333 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PCNX4Q63HM2 1172 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF354CQ86Y25 554 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 NMD3Q96D46 503 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 RBM17Q96I25 401 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 RANBP17Q9H2T7 1088 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PLK2Q9NYY3 685 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ZSWIM5Q9P217 1185 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 FKBP6O75344 327 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 PABPC4LP0CB38 370 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 FCER1AP12319 257 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms