RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CCDC42Q96M95 316 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 HAPLN3Q96S86 360 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 LLPHQ9BRT6 129 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 BHMT2Q9H2M3 363 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 EBF3Q9H4W6 596 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 SH2D4AQ9H788 454 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 SIAEQ9HAT2 523 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 SACM1LQ9NTJ5 587 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 HESX1Q9UBX0 185 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PRKAG3Q9UGI9 489 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 LIMA1Q9UHB6 759 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 TBK1Q9UHD2 729 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 LRCH1Q9Y2L9 728 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 GPSM3Q9Y4H4 160 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 TRIM17Q9Y577 477 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 NUB1Q9Y5A7 615 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 GMEB1Q9Y692 573 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 FBP2O00757 339 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 KCNK3O14649 394 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SERPINB7O75635 380 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 DGKIO75912 1065 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 MMP10P09238 476 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 T-ENOLP0DO92 83 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 AMPD1P23109 780 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 TCEA1P23193 301 aaKnown RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 VHLP40337 213 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 KCNQ4P56696 695 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 KRT83P78385 493 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SLC29A2Q14542 456 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 KIF22Q14807 665 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 KYNUQ16719 465 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 LONRF1Q17RB8 773 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 CFAP221Q4G0U5 840 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 TMC3Q7Z5M5 1100 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 PHLDB2Q86SQ0 1253 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 PRUNE1Q86TP1 453 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 ZFPM1Q8IX07 1006 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 PPP4R1Q8TF05 950 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SLC7A6OSQ96CW6 309 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 PAGE5Q96GU1 130 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 GPATCH3Q96I76 525 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 TTC1Q99614 292 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 MIPEPQ99797 713 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 GLT8D2Q9H1C3 349 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 KANSL2Q9H9L4 492 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SLCO1B3Q9NPD5 702 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 EURLQ9NYK6 297 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 PCDHGA3Q9Y5H0 932 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 A0A1B0GTW7 788 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 C2orf71A6NGG8 1288 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 KLRF2D3W0D1 207 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 TXNDC9O14530 226 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 VILLO15195 856 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 DDHD2O94830 711 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 UNC5CO95185 931 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 BAG3O95817 575 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SKIP12755 728 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 CYLC1P35663 651 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 KIF11P52732 1056 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 RALGDSQ12967 914 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 ITPK1Q13572 414 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 GIT2Q14161 759 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SPA17Q15506 151 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 CNGA2Q16280 664 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 AKAP4Q5JQC9 854 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 EPHA10Q5JZY3 1008 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 C9orf131Q5VYM1 1079 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.98□□□□□ -1.77
MCF2-210ENST00000536274 DEPDC4Q8N2C3 294 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 MREGQ8N565 214 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SH3RF3Q8TEJ3 882 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 GAB3Q8WWW8 586 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 NCSTNQ92542 709 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 P3H4Q92791 437 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 CCDC51Q96ER9 411 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 CLPTM1LQ96KA5 538 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 IFT74Q96LB3 600 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 TCHPQ9BT92 498 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SENP6Q9GZR1 1112 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 ALDH8A1Q9H2A2 487 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 BTBD7Q9P203 1132 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 FBXO2Q9UK22 296 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 CHKBQ9Y259 395 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 V9GY48 417 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 ANO9A1A5B4 782 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 CFAP69A5D8W1 941 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 RGS16O15492 202 aaPredicted RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 ZC3H11AO75152 810 aaKnown RBP eCLIP3.98□□□□□ -1.77
MCF2-210ENST00000536274 OAS1P00973 400 aaKnown RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 HSPA8P11142 646 aaKnown RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 BCRP11274 1271 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 NR4A1P22736 598 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 PRCPP42785 496 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 MAGEA1P43355 309 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 MTIF2P46199 727 aaKnown RBP3.98□□□□□ -1.77
MCF2-210ENST00000536274 ZNF131P52739 623 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 PMS2P54278 862 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 GK3PQ14409 553 aa3.98□□□□□ -1.77
MCF2-210ENST00000536274 SEPT7Q16181 437 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms