RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PTDSS1P48651 473 aaKnown RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 CDK8P49336 464 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 MCCD1P59942 119 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 STRN3Q13033 797 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 PRPF4BQ13523 1007 aaKnown RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 SLC15A2Q16348 729 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 CTC1Q2NKJ3 1217 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 PABPC1LQ4VXU2 614 aaKnown RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 POTEBQ6S5H4 581 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 MOXD1Q6UVY6 613 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 PPP1R21Q6ZMI0 780 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 C4orf50Q6ZRC1 276 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 SYDE1Q6ZW31 735 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 TDRPQ86YL5 185 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 CPNE8Q86YQ8 564 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 ZNF444Q8N0Y2 327 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 LARGE2Q8N3Y3 721 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 RIBC1Q8N443 379 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 SLC17A8Q8NDX2 589 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 ZNF398Q8TD17 642 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 UCMAQ8WVF2 138 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 NRG4Q8WWG1 115 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 CRYGNQ8WXF5 182 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 EZH1Q92800 747 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 COA7Q96BR5 231 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 NUDCD1Q96RS6 583 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 NAP1L4Q99733 375 aaKnown RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 MIPEPQ99797 713 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 AGPAT1Q99943 283 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 UBA5Q9GZZ9 404 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 KIAA1683Q9H0B3 1180 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 INTS2Q9H0H0 1204 aaKnown RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 DENND2DQ9H6A0 471 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 DNAJC18Q9H819 358 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 PRDM11Q9NQV5 511 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 SAR1AQ9NR31 198 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 CCDC87Q9NVE4 849 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 NMRK1Q9NWW6 199 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 DDX43Q9NXZ2 648 aaKnown RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 RGL1Q9NZL6 768 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 GCNT4Q9P109 453 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 DDX25Q9UHL0 483 aaKnown RBP7.42□□□□□ -1.22
CPSF7-215ENST00000536145 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 NAALADL1Q9UQQ1 740 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 LRCH1Q9Y2L9 728 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 ZNF536O15090 1300 aa7.42□□□□□ -1.22
CPSF7-215ENST00000536145 DOT1LQ8TEK3 1739 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 SBF2Q86WG5 1849 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 CDK5RAP2Q96SN8 1893 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 MAPK13O15264 365 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 NVLO15381 856 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PRPF4O43172 522 aaKnown RBP eCLIP7.41□□□□□ -1.225e-6■□□□□ 10.8
CPSF7-215ENST00000536145 HNRNPCL1O60812 293 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 SMIM24O75264 130 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 CYP1A2P05177 515 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 SPATA31C1P0DKV0 1188 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PIM1P11309 404 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 KRT13P13646 458 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 COMTP21964 271 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 RPL13P26373 211 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PTPN4P29074 926 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 HIBADHP31937 336 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 STX2P32856 288 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 RFC4P35249 363 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PCK1P35558 622 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 VHLP40337 213 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 RFC5P40937 340 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PSMC4P43686 418 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 KCNJ1P48048 391 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 FMO5P49326 533 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 CAV1Q03135 178 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 RNASELQ05823 741 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 RASA2Q15283 850 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 UBE2SQ16763 222 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 TSNAXIP1Q2TAA8 658 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 GNPTABQ3T906 1256 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 ASPRV1Q53RT3 343 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 SEL1L2Q5TEA6 688 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 FAM91A1Q658Y4 838 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 SPTY2D1Q68D10 685 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 ARHGEF18Q6ZSZ5 1173 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 INTS8Q75QN2 995 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 SDCCAG8Q86SQ7 713 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 UBL4BQ8N7F7 174 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 GDAP1Q8TB36 358 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 DYDC1Q8WWB3 177 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 CELF1Q92879 486 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 GJA10Q969M2 543 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 VTI1AQ96AJ9 217 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 ERP27Q96DN0 273 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 DTNBP1Q96EV8 351 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PCDHB18PQ96TA0 734 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 EYA3Q99504 573 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 POP1Q99575 1024 aaKnown RBP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 EPAS1Q99814 870 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 CCDC28BQ9BUN5 200 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 FAM192AQ9GZU8 254 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 TAOK3Q9H2K8 898 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 BCAS3Q9H6U6 928 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms