RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
LDLR-203ENST00000535915 MYO1FO00160 1098 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 PMM2O15305 246 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 MMEP08473 750 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 COMTP21964 271 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 CIAPIN1Q6FI81 312 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 ANO5Q75V66 913 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 ARFGAP2Q8N6H7 521 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 SAMD3Q8N6K7 520 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 EPN3Q9H201 632 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 KMT5AQ9NQR1 393 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 ATP8A1Q9Y2Q0 1164 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 ERLIN2O94905 339 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 GZMAP12544 262 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 DHX34Q14147 1143 aaKnown RBP14.16□□□□□ -0.14
LDLR-203ENST00000535915 TCEAL1Q15170 157 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 ODF2Q5BJF6 829 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 DUPD1Q68J44 220 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 NLRX1Q86UT6 975 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 MAP4K3Q8IVH8 894 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 PARD3BQ8TEW8 1205 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 TEPSINQ96N21 525 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 FAM169AQ9Y6X4 670 aa14.16□□□□□ -0.14
LDLR-203ENST00000535915 FAM187AA6NFU0 413 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 CTNND1O60716 968 aaKnown RBP14.15□□□□□ -0.14
LDLR-203ENST00000535915 BIRC3Q13489 604 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 TNFAIP1Q13829 316 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 SEL1L2Q5TEA6 688 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 JAMLQ86YT9 394 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 SHC3Q92529 594 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 C18orf8Q96DM3 657 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 CAMKK2Q96RR4 588 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 RPS6KC1Q96S38 1066 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 MOV10L1Q9BXT6 1211 aaKnown RBP14.15□□□□□ -0.14
LDLR-203ENST00000535915 TMEM8AQ9HCN3 771 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 RASAL2Q9UJF2 1139 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 USP20Q9Y2K6 914 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 PCDHA10Q9Y5I2 948 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 PHF2O75151 1096 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 EGFRP00533 1210 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 SOX10P56693 466 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 FMO1Q01740 532 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 PPARDQ03181 441 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 BAATQ14032 418 aaPredicted RBP14.15□□□□□ -0.14
LDLR-203ENST00000535915 PTGISQ16647 500 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 EFCAB13Q8IY85 973 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 ZNF564Q8TBZ8 553 aaPredicted RBP14.15□□□□□ -0.14
LDLR-203ENST00000535915 POMGNT1Q8WZA1 660 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 CEP170P1Q96L14 293 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 NUP85Q9BW27 656 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 TOPORSQ9NS56 1045 aaPredicted RBP14.15□□□□□ -0.14
LDLR-203ENST00000535915 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 RIPK3Q9Y572 518 aa14.15□□□□□ -0.14
LDLR-203ENST00000535915 CYP11B1P15538 503 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 HSPA6P17066 643 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 PDE6CP51160 858 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 IFFO1Q0D2I5 559 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 KRT71Q3SY84 523 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
LDLR-203ENST00000535915 OTUD6AQ7L8S5 288 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 FBXL13Q8NEE6 735 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 BSNDQ8WZ55 320 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 ELMO3Q96BJ8 720 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 ZNF653Q96CK0 615 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 HVCN1Q96D96 273 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 ATG4CQ96DT6 458 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 WNK4Q96J92 1243 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 BTBD6Q96KE9 485 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 NT5C1BQ96P26 610 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 MYCBPQ99417 103 aaPredicted RBP14.14□□□□□ -0.15
LDLR-203ENST00000535915 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 GABBR1Q9UBS5 961 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 TRPC6Q9Y210 931 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 SNX24Q9Y343 169 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 VWA5AO00534 786 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 SPOPO43791 374 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 DLATP10515 647 aaKnown RBP14.14□□□□□ -0.15
LDLR-203ENST00000535915 CCND2P30279 289 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 CHRNA3P32297 505 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 GPC3P51654 580 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 PLTPP55058 493 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 B4GALNT4Q76KP1 1039 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 TAS1R2Q8TE23 839 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 PPM1EQ8WY54 764 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 JDP2Q8WYK2 163 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 KIFAP3Q92845 792 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 MAGOHBQ96A72 148 aaKnown RBP14.14□□□□□ -0.15
LDLR-203ENST00000535915 ZDHHC18Q9NUE0 388 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.14□□□□□ -0.154e-7■■□□□ 11.6
LDLR-203ENST00000535915 RAB20Q9NX57 234 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 COQ4Q9Y3A0 265 aa14.14□□□□□ -0.15
LDLR-203ENST00000535915 DOCK1Q14185 1865 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 PPFIA2O75334 1257 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 MTA2O94776 668 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 PEX5P50542 639 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 SEC24CP53992 1094 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 AGBL2Q5U5Z8 902 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 USP37Q86T82 979 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 PRELID2Q8N945 189 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 HELQQ8TDG4 1101 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms