RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 BCAR1P56945 870 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 UBE3AQ05086 875 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 RESP18Q5W5W9 173 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 LRRC27Q9C0I9 530 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 SCAND2PQ9GZW5 306 aaPredicted RBP24.38■■□□□ 1.49
VPS37C-202ENST00000535818 NRDE2Q9H7Z3 1164 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 SNTG2Q9NY99 539 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 SPG21Q9NZD8 308 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 KLK14Q9P0G3 267 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 PLXNA4Q9HCM2 1894 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 NT5C1B-RDH14C9J2C7 533 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 IDEP14735 1019 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 SCP2P22307 547 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 AFF1P51825 1210 aaKnown RBP24.37■■□□□ 1.49
VPS37C-202ENST00000535818 KRT17Q04695 432 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 ZBTB33Q86T24 672 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 SFR1Q86XK3 245 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 ZFP42Q96MM3 310 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 TNMDQ9H2S6 317 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 NSUN3Q9H649 340 aaKnown RBP24.37■■□□□ 1.49
VPS37C-202ENST00000535818 PUF60Q9UHX1 559 aaKnown RBP24.37■■□□□ 1.49
VPS37C-202ENST00000535818 GDAQ9Y2T3 454 aa24.37■■□□□ 1.49
VPS37C-202ENST00000535818 POLR2DO15514 142 aaKnown RBP24.36■■□□□ 1.49
VPS37C-202ENST00000535818 HARSP12081 509 aaKnown RBP24.36■■□□□ 1.49
VPS37C-202ENST00000535818 GAP43P17677 238 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 ABCD1P33897 745 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 MATR3P43243 847 aaKnown RBP eCLIP24.36■■□□□ 1.49
VPS37C-202ENST00000535818 E2F4Q16254 413 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 MPZL3Q6UWV2 235 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 ZNF280BQ86YH2 543 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 SLC39A11Q8N1S5 342 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 SLC17A8Q8NDX2 589 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 STAMQ92783 540 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 TMEM169Q96HH4 297 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 PYM1Q9BRP8 204 aaKnown RBP24.36■■□□□ 1.49
VPS37C-202ENST00000535818 CDT1Q9H211 546 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 ANKFY1Q9P2R3 1169 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 DNAJB4Q9UDY4 337 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 ZMYM2Q9UBW7 1377 aa24.36■■□□□ 1.49
VPS37C-202ENST00000535818 INPPL1O15357 1258 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 RECQL4O94761 1208 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 DDHD2O94830 711 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 DNAJB1P25685 340 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 NMT1P30419 496 aaKnown RBP24.35■■□□□ 1.49
VPS37C-202ENST00000535818 AMPD3Q01432 767 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 PLCB3Q01970 1234 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 ZPBP2Q6X784 338 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 MRPS27Q92552 414 aaKnown RBP24.35■■□□□ 1.49
VPS37C-202ENST00000535818 DNAJC19Q96DA6 116 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 CCDC94Q9BW85 323 aaPredicted RBP24.35■■□□□ 1.49
VPS37C-202ENST00000535818 TLR9Q9NR96 1032 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 SEL1LQ9UBV2 794 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 KCNH3Q9ULD8 1083 aa24.35■■□□□ 1.49
VPS37C-202ENST00000535818 TRANK1O15050 2925 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 TOM1L1O75674 476 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 GALTP07902 379 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 MCF2P10911 925 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 SLC11A1P49279 550 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 LIG4P49917 911 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 GRIK3Q13003 919 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 TPRNQ4KMQ1 711 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 TCEAL5Q5H9L2 206 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 ADALQ6DHV7 355 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 MICAL1Q8TDZ2 1067 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 PPP2R3CQ969Q6 453 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 TMEM175Q9BSA9 504 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 MAGEF1Q9HAY2 307 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 PTPRHQ9HD43 1115 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 PRDM6Q9NQX0 595 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 MIOSQ9NXC5 875 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 TBX20Q9UMR3 447 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 LZTS1Q9Y250 596 aa24.34■■□□□ 1.49
VPS37C-202ENST00000535818 TDRD15B5MCY1 1934 aaKnown RBP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 HNRNPDLO14979 420 aaKnown RBP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 ALDH2P05091 517 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 PROZP22891 400 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 YARSP54577 528 aaKnown RBP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 OSTNP61366 133 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 CAMK1Q14012 370 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 NOLC1Q14978 699 aaKnown RBP eCLIP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 HERC4Q5GLZ8 1057 aaPredicted RBP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 CCDC65Q8IXS2 484 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 CEP57L1Q8IYX8 460 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 KCNN1Q92952 543 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 ZBTB45Q96K62 511 aaPredicted RBP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 FIZ1Q96SL8 496 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 MRPL44Q9H9J2 332 aaKnown RBP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 PANK4Q9NVE7 773 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 KBTBD4Q9NVX7 518 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 THEGQ9P2T0 379 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 CIZ1Q9ULV3 898 aaPredicted RBP24.33■■□□□ 1.49
VPS37C-202ENST00000535818 FAN1Q9Y2M0 1017 aa24.33■■□□□ 1.49
VPS37C-202ENST00000535818 TCHHQ07283 1943 aa24.32■■□□□ 1.48
VPS37C-202ENST00000535818 ATG2AQ2TAZ0 1938 aa24.32■■□□□ 1.48
VPS37C-202ENST00000535818 CLDN3O15551 220 aa24.32■■□□□ 1.48
VPS37C-202ENST00000535818 B4GALT3O60512 393 aa24.32■■□□□ 1.48
VPS37C-202ENST00000535818 NR1I2O75469 434 aa24.32■■□□□ 1.48
VPS37C-202ENST00000535818 CMA1P23946 247 aa24.32■■□□□ 1.48
VPS37C-202ENST00000535818 IRS1P35568 1242 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms