RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MUTP22033 750 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 GLRA2P23416 452 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 CLCN4P51793 760 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 EARS2Q5JPH6 523 aaKnown RBP14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 UBXN11Q5T124 520 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 LIN9Q5TKA1 542 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 COLGALT2Q8IYK4 626 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 SMG8Q8ND04 991 aaKnown RBP14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 ASAP3Q8TDY4 903 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 SLC22A17Q8WUG5 538 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 HDAC7Q8WUI4 952 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 EIF2AQ9BY44 585 aaKnown RBP14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 FOXP1Q9H334 677 aaPredicted RBP14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 SH2B1Q9NRF2 756 aaPredicted RBP14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 IGSF9Q9P2J2 1179 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 KCNG1Q9UIX4 513 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 ADAM28Q9UKQ2 775 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 HES2Q9Y543 173 aa14.64□□□□□ -0.07
CLSTN3-205ENST00000535452 CCDC195A0A1B0GUA6 201 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 FAM205CA6NFA0 338 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 ZBTB39O15060 712 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 JAK2O60674 1132 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 CENPBP07199 599 aaPredicted RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 AKAP5P24588 427 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 CCT6AP40227 531 aaKnown RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 TRAPPC10P48553 1259 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 EFNA5P52803 228 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 YARSP54577 528 aaKnown RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 GUCY1B3Q02153 619 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 TDGQ13569 410 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 TTC38Q5R3I4 469 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 FUT10Q6P4F1 479 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 PADI6Q6TGC4 694 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 CCDC83Q8IWF9 413 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 FLCNQ8NFG4 579 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 SMG7Q92540 1137 aaKnown RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 TNFRSF25Q93038 417 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 ZFP42Q96MM3 310 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 POLR3CQ9BUI4 534 aaPredicted RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 NXF3Q9H4D5 531 aaKnown RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 XPNPEP1Q9NQW7 623 aa14.63□□□□□ -0.07
CLSTN3-205ENST00000535452 INPPL1O15357 1258 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 TEX28O15482 410 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 TRAPPC3O43617 180 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 C1RP00736 705 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 THP07101 528 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 RPA1P27694 616 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 NAMPTP43490 491 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 DSG1Q02413 1049 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 TUSC3Q13454 348 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 HSP90AA2PQ14568 343 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 ZNF174Q15697 407 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 DCAF4L1Q3SXM0 396 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 KRT79Q5XKE5 535 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 CATSPER3Q86XQ3 398 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 CEP57Q86XR8 500 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 GPR65Q8IYL9 337 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 CMASQ8NFW8 434 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 BCL7CQ8WUZ0 217 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 RIN2Q8WYP3 895 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 KIFAP3Q92845 792 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 NXPE3Q969Y0 559 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 ASIC4Q96FT7 647 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 MTMR9Q96QG7 549 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 TOPORSQ9NS56 1045 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 KLK14Q9P0G3 267 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 LRWD1Q9UFC0 647 aa14.62□□□□□ -0.07
CLSTN3-205ENST00000535452 BRD1O95696 1058 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 PRKCBP05771 671 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 ASGR2P07307 311 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 DSC1Q08554 894 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 ASTLQ6HA08 431 aaPredicted RBP14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 PALB2Q86YC2 1186 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 ZDHHC7Q9NXF8 308 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.61□□□□□ -0.074e-6■■□□□ 12.1
CLSTN3-205ENST00000535452 MUC6Q6W4X9 2439 aa14.61□□□□□ -0.07
CLSTN3-205ENST00000535452 CCDC169A6NNP5 214 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 K7ERI5 159 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 LAD1O00515 517 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 ACKR2O00590 384 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 B4GALT5O43286 388 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 ST18O60284 1047 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 DTNBO60941 627 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 XYLBO75191 536 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 LARGE1O95461 756 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 CYP11B2P19099 503 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 CLCN5P51795 746 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 DMP1Q13316 513 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 FAM187BQ17R55 369 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 IER5LQ5T953 404 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 POTEGQ6S5H5 508 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 CDR2LQ86X02 465 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 NOSTRINQ8IVI9 506 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 GLYCTKQ8IVS8 523 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 PRSS33Q8NF86 280 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms