RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 KLHDC9Q8NEP7 349 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 POP1Q99575 1024 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TCHPQ9BT92 498 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GANQ9H2C0 597 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SOWAHDA6NJG2 315 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 LRRIQ3A6PVS8 624 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 KIAA0391O15091 583 aaKnown RBP22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ASGR1P07306 291 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 FECHP22830 423 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MYL7Q01449 175 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ARHGEF6Q15052 776 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 KCNA10Q16322 511 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NBPF20Q3BBV1 942 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 DNAJB3Q8WWF6 145 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 BAP1Q92560 729 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 KIAA1586Q9HCI6 787 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NLRC4Q9NPP4 1024 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PRMT7Q9NVM4 692 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GINS2Q9Y248 185 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ARHGAP6O43182 974 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZEB2O60315 1214 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 WNT7BP56706 349 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 POLR2FP61218 127 aaKnown RBP22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ATF7IP2Q5U623 682 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CCSAPQ6IQ19 270 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 WDR59Q6PJI9 974 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TSHZ1Q6ZSZ6 1077 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZNF410Q86VK4 478 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZNF397Q8NF99 534 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ADAMTS10Q9H324 1103 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PTPRHQ9HD43 1115 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TOPORSQ9NS56 1045 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CEP72Q9P209 647 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TRIM17Q9Y577 477 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PTCH2Q9Y6C5 1203 aa22.1■■□□□ 1.13
TNFRSF1A-205ENST00000534885 FAM189A1O60320 539 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PROZP22891 400 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MTF1Q14872 753 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 FAM187BQ17R55 369 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 EEF1DP3Q658K8 133 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CACNA2D4Q7Z3S7 1137 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SLAIN1Q8ND83 568 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TMC2Q8TDI7 906 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CDHR5Q9HBB8 845 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SIX2Q9NPC8 291 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PLCB1Q9NQ66 1216 aa22.09■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GPR32O75388 356 aa22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 LDHAP00338 332 aaKnown RBP22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 DLATP10515 647 aaKnown RBP22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CST5P28325 142 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GRK4P32298 578 aa22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MAP2K1Q02750 393 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MCL1Q07820 350 aa22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TMEM132AQ24JP5 1023 aa22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 E4F1Q66K89 784 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TRIM65Q6PJ69 517 aa22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NAA15Q9BXJ9 866 aaKnown RBP22.08■■□□□ 1.13
TNFRSF1A-205ENST00000534885 RBAK-RBAKDNI3L0D1 243 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TNFSF9P41273 254 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 NOLC1Q14978 699 aaKnown RBP eCLIP22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 ZNF568Q3ZCX4 644 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 KLHDC7AQ5VTJ3 777 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 MPZL3Q6UWV2 235 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 RRAGAQ7L523 313 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 FAM84AQ96KN4 292 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CHP1Q99653 195 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 BEGAINQ9BUH8 593 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TMEM117Q9H0C3 514 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 RBAKQ9NYW8 714 aaPredicted RBP22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GTF2IRD1Q9UHL9 959 aa22.08■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CNTNAP2Q9UHC6 1331 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 LRRC53A6NM62 1247 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 USP27XA6NNY8 438 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GNAT1P11488 350 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 UCHL3P15374 230 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 FGFR4P22455 802 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PRMT2P55345 433 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 RAD9BQ6WBX8 426 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GPIHBP1Q8IV16 184 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CPB2Q96IY4 423 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 EDEM3Q9BZQ6 932 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PDE11AQ9HCR9 933 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TNFSF13BQ9Y275 285 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 LRRN2O75325 713 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 KCNJ6P48051 423 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 MXI1P50539 228 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PSMD6Q15008 389 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 MEA1Q16626 185 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TSR1Q2NL82 804 aaKnown RBP22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GJB7Q6PEY0 223 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 SRGAP1Q7Z6B7 1085 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 LMO3Q8TAP4 145 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PRIMPOLQ96LW4 560 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 OSMRQ99650 979 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 FHOD1Q9Y613 1164 aa22.07■■□□□ 1.12
TNFRSF1A-205ENST00000534885 OGTO15294 1046 aa22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 ARF4P18085 180 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 FAM47CQ5HY64 1035 aa22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 LMBRD2Q68DH5 695 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GDF6Q6KF10 455 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms