RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 IRAK3Q9Y616 596 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 DENND4AQ7Z401 1863 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 KRBA1A5PL33 1030 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 POTEMA6NI47 508 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 B4GALT3O60512 393 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 KINO60870 393 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 NCLP19338 710 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 AXLP30530 894 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 ALDH7A1P49419 539 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 AFF1P51825 1210 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 FOSBP53539 338 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 ORC2Q13416 577 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 GLB1LQ6UWU2 654 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 DDX53Q86TM3 631 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 CATSPER3Q86XQ3 398 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 C1orf210Q8IVY1 113 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 C4orf32Q8N8J7 132 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 SMG8Q8ND04 991 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 FBXO18Q8NFZ0 1043 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 ASAP3Q8TDY4 903 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 PIGOQ8TEQ8 1089 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 AUTS2Q8WXX7 1259 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 IGSF21Q96ID5 467 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 C8orf76Q96K31 380 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 POLR3CQ9BUI4 534 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 ZBP1Q9H171 429 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 TUFT1Q9NNX1 390 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 BMP2KQ9NSY1 1161 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 WNT16Q9UBV4 365 aa11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 CDV3Q9UKY7 258 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-203ENST00000534830 CNTNAP2Q9UHC6 1331 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 MTCL1Q9Y4B5 1905 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 A0A087WWV3 80 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 TSPAN1O60635 241 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 ZC3H11AO75152 810 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 MED24O75448 989 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 DDHD2O94830 711 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 CTSAP10619 480 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 GLRA2P23416 452 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 MCM7P33993 719 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 RBM25P49756 843 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 HMGN5P82970 282 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 GUCY1B3Q02153 619 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 MBTD1Q05BQ5 628 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 CAPSQ13938 189 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 SAFBQ15424 915 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 LONRF3Q496Y0 759 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 ZNF280BQ86YH2 543 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 SUMF1Q8NBK3 374 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 CNNM3Q8NE01 707 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 BCL7CQ8WUZ0 217 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 RSAD2Q8WXG1 361 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 VN1R3Q9BXE9 311 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 IGSF9Q9P2J2 1179 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 DNAJB4Q9UDY4 337 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 RALYQ9UKM9 306 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 SIT1Q9Y3P8 196 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 CHD8Q9HCK8 2581 aa11.18□□□□□ -0.62
CLSTN3-203ENST00000534830 LILRB3O75022 631 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 EFEMP2O95967 443 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 CENPBP07199 599 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 ARF4P18085 180 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 MUTP22033 750 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 U2AF2P26368 475 aaKnown RBP eCLIP11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 RPA1P27694 616 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 SLC11A1P49279 550 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 ZNF174Q15697 407 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 GPR149Q86SP6 731 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 VPS52Q8N1B4 723 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 SLC22A17Q8WUG5 538 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 CCDC51Q96ER9 411 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 TMEM169Q96HH4 297 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 TMEM175Q9BSA9 504 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 EIF2AQ9BY44 585 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 CSRNP2Q9H175 543 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 SFXN1Q9H9B4 322 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 MIOSQ9NXC5 875 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 KANSL3Q9P2N6 904 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 IPPQ9Y573 584 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 TRIP11Q15643 1979 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
CLSTN3-203ENST00000534830 CHD6Q8TD26 2715 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 A0A1B0GUA9 196 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 ERLIN2O94905 339 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 ATP2B1P20020 1258 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 TOB1P50616 345 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 DSC1Q08554 894 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms