RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 LEXMQ3ZCV2 418 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ZBTB41Q5SVQ8 909 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 AXDND1Q5T1B0 1012 aaPredicted RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 KRT79Q5XKE5 535 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 HAUS3Q68CZ6 603 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 SCARA3Q6AZY7 606 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 NOTUMQ6P988 496 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 SYCE2Q6PIF2 218 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 GPBP1Q86WP2 473 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 EXOC8Q8IYI6 725 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 THNSL1Q8IYQ7 743 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 LRRC43Q8N309 656 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 LINC00301Q8NCQ3 95 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 TMEM161BQ8NDZ6 487 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 GLIS3Q8NEA6 775 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ZSWIM2Q8NEG5 633 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ERMNQ8TAM6 284 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 RAD54LQ92698 747 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 STAMQ92783 540 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 SYMPKQ92797 1274 aaKnown RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 DNAJC19Q96DA6 116 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 IGSF21Q96ID5 467 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 B3GALT6Q96L58 329 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ZMAT2Q96NC0 199 aaKnown RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 ZNF558Q96NG5 402 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ACO2Q99798 780 aaKnown RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 REEP2Q9BRK0 252 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 NTPCRQ9BSD7 190 aaKnown RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 TARS2Q9BW92 718 aaKnown RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 PANK2Q9BZ23 570 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 GPR62Q9BZJ7 368 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 CCSER1Q9C0I3 900 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ZBP1Q9H171 429 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 CDT1Q9H211 546 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 TLR9Q9NR96 1032 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 CLDND1Q9NY35 253 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 SPG21Q9NZD8 308 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 BARX2Q9UMQ3 279 aaPredicted RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 COG5Q9UP83 839 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 DNM3Q9UQ16 869 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 RWDD3Q9Y3V2 267 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 PCDHB12Q9Y5F1 795 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 SRPRBQ9Y5M8 271 aaKnown RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 USP34Q70CQ2 3546 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 COL4A3Q01955 1670 aa5.59□□□□□ -1.52
USH1C-210ENST00000534556 MYO15AQ9UKN7 3530 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 MYMKA6NI61 221 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 CCDC169A6NNP5 214 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 ANKRD63C9JTQ0 380 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 HOXA2O43364 376 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 CLASP2O75122 1294 aaKnown RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 SSBP05455 408 aaKnown RBP eCLIP5.58□□□□□ -1.52
USH1C-210ENST00000534556 ZSCAN22P10073 491 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 MAPTP10636 758 aaKnown RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 EPCAMP16422 314 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 CASP1P29466 404 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 NMT1P30419 496 aaKnown RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 AXLP30530 894 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 LONP1P36776 959 aaKnown RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 RAB27AP51159 221 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 CASP5P51878 434 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 ZNF131P52739 623 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 NCKAP1LP55160 1127 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 WNT7BP56706 349 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 UBE3AQ05086 875 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 KCNA1Q09470 495 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 PRPF4BQ13523 1007 aaKnown RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 TFDP1Q14186 410 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 E2F4Q16254 413 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 PTPROQ16827 1216 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 TIGD5Q53EQ6 642 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 ZC2HC1CQ53FD0 456 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 XKR4Q5GH76 650 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 GLRA4Q5JXX5 417 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 ATF7IP2Q5U623 682 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 PTCRAQ6ISU1 281 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 SLC27A1Q6PCB7 646 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 SHC4Q6S5L8 630 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 GLB1LQ6UWU2 654 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 ALKAL1Q6UXT8 129 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 FAM43BQ6ZT52 329 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 FAM178BQ8IXR5 827 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 ABI1Q8IZP0 508 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 VPS52Q8N1B4 723 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 EFHBQ8N7U6 833 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 C12orf76Q8N812 135 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 MRPL43Q8N983 215 aaKnown RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 SLC22A17Q8WUG5 538 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 KIFAP3Q92845 792 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 CCDC51Q96ER9 411 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 FAM84AQ96KN4 292 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 PRIMPOLQ96LW4 560 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 AK8Q96MA6 479 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 CCDC43Q96MW1 224 aaKnown RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 TCF25Q9BQ70 676 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 APOL5Q9BWW9 433 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 STRA6Q9BX79 667 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 S1PR5Q9H228 398 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 TMEM134Q9H6X4 195 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms